RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 KLHL13Q9P2N7 655 aa11.29□□□□□ -0.6
LMCD1-202ENST00000397386 EXOGQ9Y2C4 368 aaKnown RBP11.29□□□□□ -0.6
LMCD1-202ENST00000397386 ALPK2Q86TB3 2170 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 IGHV3-15A0A0B4J1V0 119 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 SLC35F4A4IF30 521 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 ZNF726A6NNF4 738 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 GLCEO94923 617 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 FADS2O95864 444 aaKnown RBP11.28□□□□□ -0.6
LMCD1-202ENST00000397386 CLPTM1O96005 669 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 HTR1AP08908 422 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 PGA4P0DJD7 388 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 PGA3P0DJD8 388 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 SMIM18P0DKX4 95 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 RASGEF1BQ0VAM2 473 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 BLMHQ13867 455 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 MELKQ14680 651 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 HIST3H3Q16695 136 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 KLHL12Q53G59 568 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 THEM4Q5T1C6 240 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 EEF1A1P5Q5VTE0 462 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 TMEM154Q6P9G4 183 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 DNM1P34Q6PK57 102 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 STX19Q8N4C7 294 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 ZIC4Q8N9L1 334 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 TEX19Q8NA77 164 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 POMGNT2Q8NAT1 580 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 OR9Q1Q8NGQ5 310 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 FAR1Q8WVX9 515 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 ROBO4Q8WZ75 1007 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 KISS1RQ969F8 398 aaPredicted RBP11.28□□□□□ -0.6
LMCD1-202ENST00000397386 TMEM45BQ96B21 275 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 INTS12Q96CB8 462 aaKnown RBP11.28□□□□□ -0.6
LMCD1-202ENST00000397386 RNFT2Q96EX2 444 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 RBP7Q96R05 134 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 JAM3Q9BX67 310 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 CDCA4Q9BXL8 241 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 RACGAP1Q9H0H5 632 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 SLC25A18Q9H1K4 315 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 OR51V1Q9H2C8 321 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 MED20Q9H944 212 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 FGF20Q9NP95 211 aaPredicted RBP11.28□□□□□ -0.6
LMCD1-202ENST00000397386 RPRD1BQ9NQG5 326 aaKnown RBP11.28□□□□□ -0.6
LMCD1-202ENST00000397386 EMC3Q9P0I2 261 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 ZMIZ1Q9ULJ6 1067 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 DIMT1Q9UNQ2 313 aaKnown RBP11.28□□□□□ -0.6
LMCD1-202ENST00000397386 CAMK2AQ9UQM7 478 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 SNX5Q9Y5X3 404 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 FLVCR1Q9Y5Y0 555 aa11.28□□□□□ -0.6
LMCD1-202ENST00000397386 A0A1B0GTH9 108 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 CCDC182A6NF36 153 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 ZNF724A8MTY0 619 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 AHRRA9YTQ3 701 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 TRMUO75648 421 aaKnown RBP11.27□□□□□ -0.61
LMCD1-202ENST00000397386 ZNF432O94892 652 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 NR1H2P55055 460 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 CDH15P55291 814 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 CLDN17P56750 224 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 RPS7P62081 194 aaKnown RBP11.27□□□□□ -0.61
LMCD1-202ENST00000397386 MVKQ03426 396 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 RUNX1T1Q06455 604 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 KLRB1Q12918 225 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 LINC01590Q5TEZ4 76 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 B3GNT6Q6ZMB0 384 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 SPARTQ8N0X7 666 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 OR6V1Q8N148 313 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 SVOPQ8N4V2 548 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 NOXO1Q8NFA2 376 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 NMD3Q96D46 503 aaKnown RBP11.27□□□□□ -0.61
LMCD1-202ENST00000397386 LGALS12Q96DT0 336 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 CRELD1Q96HD1 420 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 TMEM80Q96HE8 168 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 TUBA1CQ9BQE3 449 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 RHNO1Q9BSD3 238 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 NUAK2Q9H093 628 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 BCO1Q9HAY6 547 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 GLRX2Q9NS18 164 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 ASB6Q9NWX5 421 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 ERVK-18Q9QC07 812 aa11.27□□□□□ -0.61
LMCD1-202ENST00000397386 LAMA5O15230 3695 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 MAP1BP46821 2468 aaKnown RBP11.26□□□□□ -0.61
LMCD1-202ENST00000397386 H7C1C5 153 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 RAB36O95755 333 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 STSP08842 583 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 CLUP10909 449 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 GSTT1P30711 240 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 PTGER4P35408 488 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 ATP6V1E1P36543 226 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 ZNF133P52736 654 aaPredicted RBP11.26□□□□□ -0.61
LMCD1-202ENST00000397386 LCN6P62502 163 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 TMEM123Q8N131 208 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 PROKR2Q8NFJ6 384 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 FNDC9Q8TBE3 224 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 ABHD3Q8WU67 409 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 SGCDQ92629 289 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 ZNF385AQ96PM9 386 aaKnown RBP11.26□□□□□ -0.61
LMCD1-202ENST00000397386 OR2M2Q96R28 347 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 SLX1AQ9BQ83 275 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 EMC6Q9BV81 110 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 PRRG4Q9BZD6 226 aa11.26□□□□□ -0.61
LMCD1-202ENST00000397386 MARCH7Q9H992 704 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms