RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ZNF48Q96MX3 618 aaPredicted RBP12.7□□□□□ -0.38
SEC13-206ENST00000397102 CACYBPQ9HB71 228 aaKnown RBP12.7□□□□□ -0.38
SEC13-206ENST00000397102 KLHL14Q9P2G3 628 aa12.7□□□□□ -0.38
SEC13-206ENST00000397102 RPS6KB2Q9UBS0 482 aa12.7□□□□□ -0.38
SEC13-206ENST00000397102 LEF1Q9UJU2 399 aaPredicted RBP12.7□□□□□ -0.38
SEC13-206ENST00000397102 IFT52Q9Y366 437 aa12.7□□□□□ -0.38
SEC13-206ENST00000397102 IGKV1D-42A0A075B6H8 117 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 A0A087WUJ7 227 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 ZNF726A6NNF4 738 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 LCKP06239 509 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 BPGMP07738 259 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 PATE4P0C8F1 98 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 MDKP21741 143 aaPredicted RBP12.69□□□□□ -0.38
SEC13-206ENST00000397102 CBLP22681 906 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 MVDP53602 400 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 ERVS71-1P61550 626 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 HOXC5Q00444 222 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 MOGQ16653 247 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 TSTQ16762 297 aaKnown RBP12.69□□□□□ -0.38
SEC13-206ENST00000397102 RPS26P11Q5JNZ5 115 aaPredicted RBP12.69□□□□□ -0.38
SEC13-206ENST00000397102 KLF17Q5JT82 389 aaPredicted RBP12.69□□□□□ -0.38
SEC13-206ENST00000397102 FAM209AQ5JX71 171 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 NHLRC1Q6VVB1 395 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 ZNF771Q7L3S4 317 aaPredicted RBP12.69□□□□□ -0.38
SEC13-206ENST00000397102 SKA3Q8IX90 412 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 BCL6BQ8N143 479 aaPredicted RBP12.69□□□□□ -0.38
SEC13-206ENST00000397102 PAQR4Q8N4S7 273 aaPredicted RBP12.69□□□□□ -0.38
SEC13-206ENST00000397102 SCAIQ8N9R8 606 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 FGFBP3Q8TAT2 258 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 SLC38A5Q8WUX1 472 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 TRIM44Q96DX7 344 aaPredicted RBP12.69□□□□□ -0.38
SEC13-206ENST00000397102 TXNDC15Q96J42 360 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 TEX37Q96LM6 180 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 OR52E6Q96RD3 313 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 OR51B6Q9H340 312 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 C1orf198Q9H425 327 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 CDH20Q9HBT6 801 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 PURGQ9UJV8 347 aaKnown RBP12.69□□□□□ -0.38
SEC13-206ENST00000397102 MMP24Q9Y5R2 645 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 NOTCH1P46531 2555 aa12.69□□□□□ -0.38
SEC13-206ENST00000397102 A0A0G2JPF8 293 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 ISPDA4D126 451 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 HNRNPCL2B2RXH8 293 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 HNRNPCL3B7ZW38 293 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 HNRNPCL1O60812 293 aaKnown RBP12.68□□□□□ -0.38
SEC13-206ENST00000397102 ENTPD5O75356 428 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 SPAG7O75391 227 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 SNAP29O95721 258 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 HNRNPCL4P0DMR1 293 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 ETFAP13804 333 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 LBPP18428 481 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 DSTNP60981 165 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 SLC3A1Q07837 685 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 SLC9A3R2Q15599 337 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 LEG1Q6P5S2 330 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 ZNF781Q8N8C0 355 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 GLB1L3Q8NCI6 653 aaPredicted RBP12.68□□□□□ -0.38
SEC13-206ENST00000397102 OR6S1Q8NH40 331 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 CCL17Q92583 94 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 GTF3AQ92664 365 aaKnown RBP12.68□□□□□ -0.38
SEC13-206ENST00000397102 TMEM19Q96HH6 336 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 BCL2L14Q9BZR8 327 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 TCF7L2Q9NQB0 619 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 UBAP1Q9NZ09 502 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 AUP1Q9Y679 476 aa12.68□□□□□ -0.38
SEC13-206ENST00000397102 ITM2AO43736 263 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 ZNF500O60304 480 aaPredicted RBP12.67□□□□□ -0.38
SEC13-206ENST00000397102 IGHV3-13P01766 116 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 MYZAPP0CAP1 466 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 OR8G3PP0DMU2 310 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 CCL2P13500 99 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 MAKP20794 623 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 DRD4P21917 467 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 CRATP43155 626 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 CSNK1A1P48729 337 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 ZNF81P51508 661 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 UCP2P55851 309 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 UFM1P61960 85 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 PUDPQ08623 228 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 ZNF154Q13106 437 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 TBC1D28Q2M2D7 210 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 PDCD4Q53EL6 469 aaKnown RBP12.67□□□□□ -0.38
SEC13-206ENST00000397102 MIER2Q8N344 545 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 SLC22A24Q8N4F4 322 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 LSMEM1Q8N8F7 131 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 DNAJA4Q8WW22 397 aaPredicted RBP12.67□□□□□ -0.38
SEC13-206ENST00000397102 TAF15Q92804 592 aaKnown RBP eCLIP12.67□□□□□ -0.38
SEC13-206ENST00000397102 TMIGD2Q96BF3 282 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 RHOXF2Q9BQY4 288 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 ASPNQ9BXN1 380 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 MMP26Q9NRE1 261 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 POLR3KQ9Y2Y1 108 aaPredicted RBP12.67□□□□□ -0.38
SEC13-206ENST00000397102 GPR45Q9Y5Y3 372 aa12.67□□□□□ -0.38
SEC13-206ENST00000397102 A0A1B0GWA3 101 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 TLDC2A0PJX2 215 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 TMEM247A6NEH6 219 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 RFXANKO14593 260 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 UBOX5O94941 541 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 MFN2O95140 757 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 PTHP01270 115 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms