RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 NME4O00746 187 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 SERPINI2O75830 405 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 FARS2O95363 451 aaKnown RBP12.13□□□□□ -0.47
SEC13-204ENST00000397099 CSF3P09919 207 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 CECR9P0C854 216 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 DRD4P21917 467 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 SERPINF1P36955 418 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 CDKN1AP38936 164 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 CAPZA2P47755 286 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 GSK3BP49841 420 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 MNAT1P51948 309 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 SEC24CP53992 1094 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 SNRPD2P62316 118 aaKnown RBP12.13□□□□□ -0.47
SEC13-204ENST00000397099 SPOCK1Q08629 439 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 TRAM2Q15035 370 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 GSG1Q2KHT4 349 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 SPATS1Q496A3 300 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 FKBP9P1Q75LS8 142 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 SLC46A3Q7Z3Q1 461 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 NKAIN4Q8IVV8 208 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 TMEM255BQ8WV15 326 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 FAM162AQ96A26 154 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 TXNDC15Q96J42 360 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 LRRC37BQ96QE4 947 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 RHNO1Q9BSD3 238 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 NDEL1Q9GZM8 345 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 ZNF442Q9H7R0 627 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 INIPQ9NRY2 104 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 B3GNT2Q9NY97 397 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 SAMD4AQ9UPU9 718 aaKnown RBP12.13□□□□□ -0.47
SEC13-204ENST00000397099 ARL2BPQ9Y2Y0 163 aa12.13□□□□□ -0.47
SEC13-204ENST00000397099 RAB36O95755 333 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 ZNF682O95780 498 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 IGHV4-39P01824 125 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 OR8G3PP0DMU2 310 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 TNFRSF1BP20333 461 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 PTNP21246 168 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 SLC9A3P48764 834 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 ZNF84P51523 738 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 NUDT6P53370 316 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 UGT2B15P54855 530 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 CLRN1P58418 232 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 PSME3P61289 254 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 PPP2R2BQ00005 443 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 RPL18Q07020 188 aaKnown RBP12.12□□□□□ -0.47
SEC13-204ENST00000397099 FAM205BPQ63HN1 556 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 CLEC2AQ6UVW9 174 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 B3GLCTQ6Y288 498 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 RRM2BQ7LG56 351 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 LRRC17Q8N6Y2 441 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 ACOT11Q8WXI4 607 aaPredicted RBP12.12□□□□□ -0.47
SEC13-204ENST00000397099 BPIFA2Q96DR5 249 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 ZNF837Q96EG3 531 aaPredicted RBP12.12□□□□□ -0.47
SEC13-204ENST00000397099 SEPHS2Q99611 448 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 FAM107BQ9H098 131 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 C1orf198Q9H425 327 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 SMURF2Q9HAU4 748 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 MYOZ1Q9NP98 299 aaPredicted RBP12.12□□□□□ -0.47
SEC13-204ENST00000397099 A4GNTQ9UNA3 340 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 HIF3AQ9Y2N7 669 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 FAM32AQ9Y421 112 aaKnown RBP12.12□□□□□ -0.47
SEC13-204ENST00000397099 FKBP7Q9Y680 259 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 HIVEP2P31629 2446 aa12.12□□□□□ -0.47
SEC13-204ENST00000397099 DHHO43323 396 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 SERPINA1P01009 418 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 PTHP01270 115 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 ERCC1P07992 297 aaPredicted RBP12.11□□□□□ -0.47
SEC13-204ENST00000397099 PGA4P0DJD7 388 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 PGA3P0DJD8 388 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 CD79AP11912 226 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 ITGA2P17301 1181 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 IDH3GP51553 393 aaPredicted RBP12.11□□□□□ -0.47
SEC13-204ENST00000397099 EFNA4P52798 201 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 RPS23P62266 143 aaKnown RBP12.11□□□□□ -0.47
SEC13-204ENST00000397099 TNK1Q13470 666 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 EFNB3Q15768 340 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 HIST3H3Q16695 136 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 SWI5Q1ZZU3 235 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 PHYHD1Q5SRE7 291 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 DNM1P46Q6ZS02 220 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 SLC22A24Q8N4F4 322 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 ANKS4BQ8N8V4 417 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 FAM156AQ8NDB6 213 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 PFN4Q8NHR9 129 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 GORASP2Q9H8Y8 452 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 KRCC1Q9NPI7 259 aaPredicted RBP12.11□□□□□ -0.47
SEC13-204ENST00000397099 TMEM5Q9Y2B1 443 aa12.11□□□□□ -0.47
SEC13-204ENST00000397099 IGHV2OR16-5A0A0B4J2B6 119 aa12.1□□□□□ -0.47
SEC13-204ENST00000397099 SLC22A23A1A5C7 686 aa12.1□□□□□ -0.47
SEC13-204ENST00000397099 SHOX2O60902 331 aaPredicted RBP12.1□□□□□ -0.47
SEC13-204ENST00000397099 QDPRP09417 244 aa12.1□□□□□ -0.47
SEC13-204ENST00000397099 SAGP10523 405 aaPredicted RBP12.1□□□□□ -0.47
SEC13-204ENST00000397099 ACADSP16219 412 aa12.1□□□□□ -0.47
SEC13-204ENST00000397099 NPR2P20594 1047 aa12.1□□□□□ -0.47
SEC13-204ENST00000397099 ACVR1BP36896 505 aa12.1□□□□□ -0.47
SEC13-204ENST00000397099 GUCA1AP43080 201 aaPredicted RBP12.1□□□□□ -0.47
SEC13-204ENST00000397099 EVX1P49640 407 aa12.1□□□□□ -0.47
SEC13-204ENST00000397099 ZNF133P52736 654 aaPredicted RBP12.1□□□□□ -0.47
SEC13-204ENST00000397099 RAB1AP62820 205 aa12.1□□□□□ -0.47
SEC13-204ENST00000397099 GNGT1P63211 74 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms