RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 SLC25A53Q5H9E4 307 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 KDM4DQ6B0I6 523 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 GTF2IRD2BQ6EKJ0 949 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 ZNF770Q6IQ21 691 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-202ENST00000396828 C1orf94Q6P1W5 598 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 LINC00114Q6XXX2 140 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 CXXC5Q7LFL8 322 aaKnown RBP9.1□□□□□ -0.95
NEDD8-202ENST00000396828 BHLHA15Q7RTS1 189 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-202ENST00000396828 GTF2IRD2Q86UP8 949 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 NRMQ8IXM6 262 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 OR9Q2Q8NGE9 314 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 GNPDA2Q8TDQ7 276 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 HSD17B8Q92506 261 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 KISS1RQ969F8 398 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-202ENST00000396828 FBXW5Q969U6 566 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 GTPBP3Q969Y2 492 aaKnown RBP9.1□□□□□ -0.95
NEDD8-202ENST00000396828 TMEM43Q9BTV4 400 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 ZNF426Q9BUY5 554 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 HDHD5Q9BXW7 423 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 REG4Q9BYZ8 158 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 Q9H521 79 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 BCO1Q9HAY6 547 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 PAPOLBQ9NRJ5 636 aaKnown RBP9.1□□□□□ -0.95
NEDD8-202ENST00000396828 ANK2Q01484 3957 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 PLCE1Q9P212 2302 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 TMED7-TICAM2A0A0A6YYA0 188 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 SHISA9B4DS77 424 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 ETV2O00321 342 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-202ENST00000396828 KPNA4O00629 521 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-202ENST00000396828 GPRIN2O60269 458 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 CYTIPO60759 359 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 IFI30P13284 250 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 CBLP22681 906 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 IGHV1-2P23083 117 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 FKBP2P26885 142 aaKnown RBP9.09□□□□□ -0.95
NEDD8-202ENST00000396828 FOXG1P55316 489 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-202ENST00000396828 RAC3P60763 192 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 PRKCDQ05655 676 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 SPOCK1Q08629 439 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 RASGEF1BQ0VAM2 473 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 COX10Q12887 443 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 TAF11Q15544 211 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 STK11Q15831 433 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 PGBD2Q6P3X8 592 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 C5orf46Q6UWT4 87 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 WDR88Q6ZMY6 472 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 Q6ZT83 130 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 GALNT5Q7Z7M9 940 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 ZNF555Q8NEP9 628 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 HTRA1Q92743 480 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 BPIFA2Q96DR5 249 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 FAM46AQ96IP4 442 aaKnown RBP9.09□□□□□ -0.95
NEDD8-202ENST00000396828 NIPSNAP1Q9BPW8 284 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 DGCR6LQ9BY27 220 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 ESRP2Q9H6T0 727 aaKnown RBP9.09□□□□□ -0.95
NEDD8-202ENST00000396828 FANCFQ9NPI8 374 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 TIGARQ9NQ88 270 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 OSGIN1Q9UJX0 560 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 RAB26Q9ULW5 256 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 TMED7Q9Y3B3 224 aa9.09□□□□□ -0.95
NEDD8-202ENST00000396828 SPIN1Q9Y657 262 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-202ENST00000396828 A0A1W2PR80 420 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 GJE1A6NN92 205 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 A8MVM7 634 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 EFCAB9A8MZ26 197 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 PIP5K1CO60331 668 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 TMCC2O75069 709 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 SNAP29O95721 258 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 IGF2P01344 180 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 IGHV3-9P01782 118 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 CCNA2P20248 432 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 FPR3P25089 353 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 OMPP47874 163 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 DIO1P49895 249 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 TSPAN31Q12999 210 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 SELENBP1Q13228 472 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 P2RY6Q15077 328 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 CD300LDQ6UXZ3 194 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 TMPRSS11FQ6ZWK6 438 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 ZER1Q7Z7L7 766 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 ADGRG3Q86Y34 549 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 PARP8Q8N3A8 854 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 DHRSXQ8N5I4 330 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 C10orf53Q8N6V4 93 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 PFN4Q8NHR9 129 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 DDIT4LQ96D03 193 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 SGTBQ96EQ0 304 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 OR5B2Q96R09 309 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 TRAF4Q9BUZ4 470 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-202ENST00000396828 POTEKPQ9BYX7 375 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 RIBC2Q9H4K1 309 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 GP6Q9HCN6 339 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 CISD1Q9NZ45 108 aaKnown RBP9.08□□□□□ -0.96
NEDD8-202ENST00000396828 KLHL9Q9P2J3 617 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 CHRNA9Q9UGM1 479 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 B3GALT5Q9Y2C3 310 aa9.08□□□□□ -0.96
NEDD8-202ENST00000396828 YLPM1P49750 1951 aaKnown RBP9.08□□□□□ -0.96
NEDD8-202ENST00000396828 TRAV36DV7A0A075B6V5 113 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 IGHV4-30-2A0A087WSY4 118 aa9.07□□□□□ -0.96
NEDD8-202ENST00000396828 A0A096LNT2 108 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms