RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SLCO1B1Q9Y6L6 691 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 A0A087WUJ7 227 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 A0A087WUU8 490 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 OR2M5A3KFT3 312 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 FAM221AA4D161 298 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 FAM227AF5H4B4 570 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 TERTO14746 1132 aaKnown RBP4.88□□□□□ -1.63
VPS41-203ENST00000395969 PRODHO43272 600 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 EEF1E1O43324 174 aaKnown RBP4.88□□□□□ -1.63
VPS41-203ENST00000395969 SUSD5O60279 629 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 LRP3O75074 770 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 HLA-DPB1P04440 258 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 IFNA4P05014 189 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 LIMS3P0CW19 117 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 LIMS4P0CW20 117 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 NR2F1P10589 423 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 PNMTP11086 282 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 SELLP14151 372 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 GABRA1P14867 456 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 GNSP15586 552 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 BTF3P20290 206 aaKnown RBP4.88□□□□□ -1.63
VPS41-203ENST00000395969 NFYAP23511 347 aaPredicted RBP4.88□□□□□ -1.63
VPS41-203ENST00000395969 HTR2AP28223 471 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 MAT2AP31153 395 aaKnown RBP4.88□□□□□ -1.63
VPS41-203ENST00000395969 MC2RQ01718 297 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 HSPB3Q12988 150 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 SKP2Q13309 424 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 EIF3IQ13347 325 aaKnown RBP4.88□□□□□ -1.63
VPS41-203ENST00000395969 CLINT1Q14677 625 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 TRAM1Q15629 374 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 ZNF311Q5JNZ3 666 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 PYHIN1Q6K0P9 492 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 NHLRC1Q6VVB1 395 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 GALNTL5Q7Z4T8 443 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 GID4Q8IVV7 300 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 ZNF527Q8NB42 609 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 OR5M9Q8NGP3 310 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 CACNG6Q9BXT2 260 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 BIN3Q9NQY0 253 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 TMEM74BQ9NUR3 256 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 ASB6Q9NWX5 421 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 KCNE3Q9Y6H6 103 aa4.88□□□□□ -1.63
VPS41-203ENST00000395969 CNTRLQ7Z7A1 2325 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 IGHV5-51A0A0C4DH38 117 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 L7N2F9 121 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 SSNA1O43805 119 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 FADS1O60427 444 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 PRAF2O60831 178 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 SDC3O75056 442 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 SC5DO75845 299 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 GATBO75879 557 aaKnown RBP4.87□□□□□ -1.63
VPS41-203ENST00000395969 OR2A4O95047 310 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 IGHEP01854 428 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 ALDOBP05062 364 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 GIPP09681 153 aaPredicted RBP4.87□□□□□ -1.63
VPS41-203ENST00000395969 ALPPL2P10696 532 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 CPN1P15169 458 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 RAB3BP20337 219 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 BCKDHBP21953 392 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 CD79BP40259 229 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 MTNR1BP49286 362 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 DUSP3P51452 185 aaPredicted RBP4.87□□□□□ -1.63
VPS41-203ENST00000395969 MMP15P51511 669 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 FXYD6P3P58550 94 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 RAB8AP61006 207 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 CHAF1BQ13112 559 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 TSTA3Q13630 321 aaPredicted RBP4.87□□□□□ -1.63
VPS41-203ENST00000395969 UBXN2BQ14CS0 331 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 SFRP5Q5T4F7 317 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 LYSMD4Q5XG99 296 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 FDX2Q6P4F2 183 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 RAB11FIP2Q7L804 512 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 MARCH9Q86YJ5 346 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 SIAH3Q8IW03 269 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 PDZD9Q8IXQ8 264 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 SLC35F3Q8IY50 421 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 CCDC116Q8IYX3 515 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 OR1N1Q8NGS0 311 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 WNT2BQ93097 391 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 ELMOD3Q96FG2 381 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 OR2A7Q96R45 310 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 DDA1Q9BW61 102 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 GAREM1Q9H706 876 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 NANSQ9NR45 359 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 CUTCQ9NTM9 273 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 NKIRAS2Q9NYR9 191 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 KLHL13Q9P2N7 655 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 RPS6KB2Q9UBS0 482 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 SLC9B1P1A6NJY1 282 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 HMSDA8MTL9 139 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 GATCO43716 136 aaKnown RBP4.87□□□□□ -1.63
VPS41-203ENST00000395969 TLX2O43763 284 aaPredicted RBP4.87□□□□□ -1.63
VPS41-203ENST00000395969 CDC40O60508 579 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS41-203ENST00000395969 LDB3O75112 727 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 SOX14O95416 240 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 CER1O95813 267 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 GBAP04062 536 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 CT62P0C5K7 136 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 MST1P26927 711 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 G0S2P27469 103 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms