RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 POM121BA6NF01 834 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 EMC8O43402 210 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 ZNF14P17017 642 aaPredicted RBP17.21■□□□□ 0.35
HOXC6-202ENST00000394331 ADH7P40394 386 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 PIK3IP1Q96FE7 263 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 INSM2Q96T92 566 aaPredicted RBP17.21■□□□□ 0.35
HOXC6-202ENST00000394331 RAB11FIP5Q9BXF6 653 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 OR52D1Q9H346 318 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 XKR8Q9H6D3 395 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 EXO5Q9H790 373 aa17.21■□□□□ 0.35
HOXC6-202ENST00000394331 CD63P08962 238 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 OR4E1P0C645 316 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 STXBP1P61764 594 aaKnown RBP17.2■□□□□ 0.34
HOXC6-202ENST00000394331 OR2A1Q8NGT9 310 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 PAQR8Q8TEZ7 354 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 TOLLIPQ9H0E2 274 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 MUC22E2RYF6 1773 aaPredicted RBP17.2■□□□□ 0.34
HOXC6-202ENST00000394331 A0A1B0GV90 55 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 LINC01553A4QN01 128 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 PPM1DO15297 605 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 TEAD1P28347 426 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 DRD3P35462 400 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 TAS2R38P59533 333 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 SIRPAP78324 504 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 C12orf76Q8N812 135 aaPredicted RBP17.2■□□□□ 0.34
HOXC6-202ENST00000394331 SFXN5Q8TD22 340 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 RPS4Y2Q8TD47 263 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 ZNF230Q9UIE0 474 aaPredicted RBP17.2■□□□□ 0.34
HOXC6-202ENST00000394331 SLC13A4Q9UKG4 626 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 GXYLT2A0PJZ3 443 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 UNC119BA6NIH7 251 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 C5orf67F2Z3F1 127 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 CDC42EP2O14613 210 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 TERTO14746 1132 aaKnown RBP17.2■□□□□ 0.34
HOXC6-202ENST00000394331 XRCC3O43542 346 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 PPP1R3DO95685 299 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 CAV2P51636 162 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 HGFACQ04756 655 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 AGERQ15109 404 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 LIPNQ5VXI9 398 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 PELI1Q96FA3 418 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 HSPA12BQ96MM6 686 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 NAA11Q9BSU3 229 aaPredicted RBP17.2■□□□□ 0.34
HOXC6-202ENST00000394331 IL21RQ9HBE5 538 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 NOX4Q9NPH5 578 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 MYO7AQ13402 2215 aa17.2■□□□□ 0.34
HOXC6-202ENST00000394331 IGKV1-8A0A0C4DH67 115 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 TRHRP34981 398 aaPredicted RBP17.19■□□□□ 0.34
HOXC6-202ENST00000394331 RGS8P57771 180 aaPredicted RBP17.19■□□□□ 0.34
HOXC6-202ENST00000394331 ZIC1Q15915 447 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 ZNF793Q6ZN11 406 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 RNASE11Q8TAA1 199 aaKnown RBP17.19■□□□□ 0.34
HOXC6-202ENST00000394331 MOAP1Q96BY2 351 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 SAT2Q96F10 170 aaPredicted RBP17.19■□□□□ 0.34
HOXC6-202ENST00000394331 ADAM19Q9H013 955 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 ZDHHC4Q9NPG8 344 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 MBNL1Q9NR56 388 aaKnown RBP17.19■□□□□ 0.34
HOXC6-202ENST00000394331 PHPT1Q9NRX4 125 aaPredicted RBP17.19■□□□□ 0.34
HOXC6-202ENST00000394331 OR1A2Q9Y585 309 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 PIN1P1O15428 100 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 IFNA10P01566 189 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 ITGA3P26006 1051 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 PRKAG1P54619 331 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 HMGN3Q15651 99 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 MLF2Q15773 248 aaPredicted RBP17.19■□□□□ 0.34
HOXC6-202ENST00000394331 ALG11Q2TAA5 492 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 MST1LQ2TV78 715 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 SLC29A4Q7RTT9 530 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 GDF7Q7Z4P5 450 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 OR51S1Q8NGJ8 323 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 OR2L8Q8NGY9 312 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 CLCC1Q96S66 551 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 SLC25A21Q9BQT8 299 aaPredicted RBP17.19■□□□□ 0.34
HOXC6-202ENST00000394331 POFUT1Q9H488 388 aa17.19■□□□□ 0.34
HOXC6-202ENST00000394331 IDSB3KWA1 339 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 NTN1O95631 604 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 CD14P08571 375 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 SLC2A1P11166 492 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 NDUFS1P28331 727 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 RBM34P42696 430 aaKnown RBP17.18■□□□□ 0.34
HOXC6-202ENST00000394331 RBP2P50120 134 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 F2RL1P55085 397 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 GAS6Q14393 721 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 TMEM240Q5SV17 173 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 AGBL4Q5VU57 503 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 REC114Q7Z4M0 266 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 INO80EQ8NBZ0 244 aaPredicted RBP17.18■□□□□ 0.34
HOXC6-202ENST00000394331 NUDCD2Q8WVJ2 157 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 ELF4Q99607 663 aaPredicted RBP17.18■□□□□ 0.34
HOXC6-202ENST00000394331 TIMM29Q9BSF4 260 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 TSPAN10Q9H1Z9 355 aaPredicted RBP17.18■□□□□ 0.34
HOXC6-202ENST00000394331 SEMA6CQ9H3T2 930 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 MRPS30Q9NP92 439 aaKnown RBP17.18■□□□□ 0.34
HOXC6-202ENST00000394331 MFNGO00587 321 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 ERAL1O75616 437 aaKnown RBP17.18■□□□□ 0.34
HOXC6-202ENST00000394331 MRPL3P09001 348 aaKnown RBP17.18■□□□□ 0.34
HOXC6-202ENST00000394331 PTHLHP12272 177 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 IL9P15248 144 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 FXYD6P3P58550 94 aa17.18■□□□□ 0.34
HOXC6-202ENST00000394331 RPS15P62841 145 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms