RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 GJD4Q96KN9 370 aaPredicted RBP12.48□□□□□ -0.41
USP49-203ENST00000394253 GABARAPL1Q9H0R8 117 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 CAMK2AQ9UQM7 478 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 ATRNL1Q5VV63 1379 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 PRAMEF4O60810 478 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 BMP1P13497 986 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 GDI1P31150 447 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 PSMB10P40306 273 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 LGALS4P56470 323 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 HERVK_113P61574 105 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 PMS2P11Q13670 270 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 PLK5Q496M5 336 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 SLC39A11Q8N1S5 342 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 NLGN4YQ8NFZ3 816 aaPredicted RBP12.48□□□□□ -0.41
USP49-203ENST00000394253 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 MYBPHLA2RUH7 354 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 ST8SIA3O43173 380 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 TCRBP04435 133 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 MPC1LP0DKB6 136 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 FABP4P15090 132 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 OR8B8Q15620 311 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 AP1G1O43747 822 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 HOXB2P14652 356 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 CASP7P55210 303 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 SFXN4Q6P4A7 337 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 ABHD15Q6UXT9 468 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 L3MBTL4Q8NA19 623 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 SEC22AQ96IW7 307 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 OR10C1Q96KK4 312 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 BARHL1Q9BZE3 327 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 A0A087X0M5 115 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 A0A1B0GTQ1 180 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 TMEM238LA0A1B0GVL6 79 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 A0A1B0GX30 115 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 NKX6-3A6NJ46 265 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 A6NJY4 79 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 CTXN2P0C2S0 81 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 GJA4P35212 333 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 OPRD1P41143 372 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 UCN3Q969E3 161 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 GPR31O00270 319 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 OR3A1P47881 315 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 KDM4DQ6B0I6 523 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 ZNF343Q6P1L6 599 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 C22orf39Q6P5X5 142 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 LINC00299Q6ZSB3 139 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 DNMT3BQ9UBC3 853 aaKnown RBP12.48□□□□□ -0.41
USP49-203ENST00000394253 OR2T7P0C7T2 308 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 NPY1RP25929 384 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 SEMG2Q02383 582 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 FCRLBQ6BAA4 426 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 TMEM88Q6PEY1 159 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 CYB561A3Q8NBI2 242 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 NSG2Q9Y328 171 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 DIP2AQ14689 1571 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 WNK1Q9H4A3 2382 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 TCRBV7S3A2A0A539 114 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 TMEM218A2RU14 115 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 CD80P33681 288 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 GGNBP1Q5YKI7 109 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 LCTLQ6UWM7 567 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 ETV3LQ6ZN32 361 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 LPAR4Q99677 370 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 IL25Q9H293 177 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 CD1DP15813 335 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 COX5AP20674 150 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 P2RX3P56373 397 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 FXNQ16595 210 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 CARFQ8N187 725 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 LINC00116Q8NCU8 138 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 SIX2Q9NPC8 291 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 GPR173Q9NS66 373 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 PADI3Q9ULW8 664 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 ERHP84090 104 aaKnown RBP12.47□□□□□ -0.41
USP49-203ENST00000394253 SLC25A11Q02978 314 aaKnown RBP12.47□□□□□ -0.41
USP49-203ENST00000394253 CDCA2Q69YH5 1023 aaPredicted RBP12.47□□□□□ -0.41
USP49-203ENST00000394253 OR51A2Q8NGJ7 313 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 KIR2DS1A0A191URI9 304 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 CRXO43186 299 aaPredicted RBP12.47□□□□□ -0.41
USP49-203ENST00000394253 CST3P01034 146 aaPredicted RBP12.47□□□□□ -0.41
USP49-203ENST00000394253 KIR2DS4P43632 304 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 RABGGTBP53611 331 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 KIR2DS1Q14954 304 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 A0A0B4J203 849 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 TIMM8AO60220 97 aaPredicted RBP12.47□□□□□ -0.41
USP49-203ENST00000394253 GPR12P47775 334 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 RNF144AP50876 292 aaPredicted RBP12.47□□□□□ -0.41
USP49-203ENST00000394253 SUOXP51687 545 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 C21orf62-AS1Q17RA5 79 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 FBXL22Q6P050 247 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 GPX8Q8TED1 209 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 FAM234AQ9H0X4 552 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 OR51B6Q9H340 312 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 CLEC20AQ6ZU45 233 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 ZNF566Q969W8 418 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 AAMDCQ9H7C9 122 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 UBTD1Q9HAC8 227 aa12.47□□□□□ -0.41
USP49-203ENST00000394253 SDHDO14521 159 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 GPR171O14626 319 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 SLC36A2Q495M3 483 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms