RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 C9orf50Q5SZB4 431 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 OR5M10Q6IEU7 315 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 GLRX5Q86SX6 157 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 ZNF227Q86WZ6 799 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 OR6N2Q8NGY6 317 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 OMA1Q96E52 524 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 MSANTD3Q96H12 275 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 KLHL15Q96M94 604 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 STEAP1Q9UHE8 339 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 EPOPA6NHQ4 379 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 H0YC42 278 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 H7C417 338 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 PYCARD-AS1I3L0S3 204 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 SEMA4FO95754 770 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 VSIG10L2P0DP72 767 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 EGR3Q06889 387 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 C1orf61Q13536 156 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 TMEM65Q6PI78 240 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 PRSS35Q8N3Z0 413 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 ZNF676Q8N7Q3 588 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 OR51A4Q8NGJ6 313 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 TMEM106AQ96A25 262 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 KTI12Q96EK9 354 aaPredicted RBP17.09■□□□□ 0.33
CBX1-202ENST00000393408 MNTQ99583 582 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 COMMD4Q9H0A8 199 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 EXOSC3Q9NQT5 275 aaKnown RBP17.09■□□□□ 0.33
CBX1-202ENST00000393408 MTFP1Q9UDX5 166 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 KIF25Q9UIL4 384 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 TDRD6O60522 2096 aaKnown RBP17.09■□□□□ 0.33
CBX1-202ENST00000393408 XIRP2A4UGR9 3374 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 TMEM212A6NML5 194 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 C10orf142B7Z368 130 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 L7N2F9 121 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 IGHV4-34P06331 123 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 NFYAP23511 347 aaPredicted RBP17.09■□□□□ 0.33
CBX1-202ENST00000393408 HSD17B7P56937 341 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 MRPS21P82921 87 aaKnown RBP17.09■□□□□ 0.33
CBX1-202ENST00000393408 FAM198BQ6UWH4 519 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 NHLRC1Q6VVB1 395 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 C3P1Q6ZMU1 363 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 MAMSTRQ6ZN01 415 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 SLC36A1Q7Z2H8 476 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 DPY19L4Q7Z388 723 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 ADGRG3Q86Y34 549 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 SIX5Q8N196 739 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 SDR16C5Q8N3Y7 309 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 OR52B4Q8NGK2 314 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 GPR148Q8TDV2 347 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 WBP1Q96G27 269 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 SEMA4CQ9C0C4 833 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 ZNF224Q9NZL3 707 aa17.09■□□□□ 0.33
CBX1-202ENST00000393408 CACNA1IQ9P0X4 2223 aa17.08■□□□□ 0.33
CBX1-202ENST00000393408 TCRBV21S2A2A0A5A6 115 aa17.08■□□□□ 0.33
CBX1-202ENST00000393408 OR6C65A6NJZ3 312 aa17.08■□□□□ 0.33
CBX1-202ENST00000393408 MCRIP1C9JLW8 97 aa17.08■□□□□ 0.33
CBX1-202ENST00000393408 PRAMEF26H0Y7S4 382 aa17.08■□□□□ 0.33
CBX1-202ENST00000393408 RBBP9O75884 186 aa17.08■□□□□ 0.33
CBX1-202ENST00000393408 HPGDP15428 266 aa17.08■□□□□ 0.33
CBX1-202ENST00000393408 RPS27P42677 84 aaKnown RBP17.08■□□□□ 0.33
CBX1-202ENST00000393408 HYAL1Q12794 435 aa17.08■□□□□ 0.33
CBX1-202ENST00000393408 EEF1A1P5Q5VTE0 462 aa17.08■□□□□ 0.33
CBX1-202ENST00000393408 CHMP1BQ7LBR1 199 aa17.08■□□□□ 0.33
CBX1-202ENST00000393408 OR8K3Q8NH51 312 aa17.08■□□□□ 0.33
CBX1-202ENST00000393408 KLHDC3Q9BQ90 382 aa17.08■□□□□ 0.33
CBX1-202ENST00000393408 ZNF264O43296 627 aa17.08■□□□□ 0.32
CBX1-202ENST00000393408 SNAPC5O75971 98 aa17.08■□□□□ 0.32
CBX1-202ENST00000393408 IL33O95760 270 aa17.08■□□□□ 0.32
CBX1-202ENST00000393408 GABRG2P18507 467 aa17.08■□□□□ 0.32
CBX1-202ENST00000393408 FAUP35544 74 aaKnown RBP17.08■□□□□ 0.32
CBX1-202ENST00000393408 FZD2Q14332 565 aa17.08■□□□□ 0.32
CBX1-202ENST00000393408 RBMS2Q15434 407 aaKnown RBP17.08■□□□□ 0.32
CBX1-202ENST00000393408 PCGF3Q3KNV8 242 aa17.08■□□□□ 0.32
CBX1-202ENST00000393408 ANKRD16Q6P6B7 361 aa17.08■□□□□ 0.32
CBX1-202ENST00000393408 METTL27Q8N6F8 245 aaPredicted RBP17.08■□□□□ 0.32
CBX1-202ENST00000393408 OR4C16Q8NGL9 310 aa17.08■□□□□ 0.32
CBX1-202ENST00000393408 ZDHHC1Q8WTX9 485 aa17.08■□□□□ 0.32
CBX1-202ENST00000393408 MCHR2Q969V1 340 aa17.08■□□□□ 0.32
CBX1-202ENST00000393408 ULBP3Q9BZM4 244 aa17.08■□□□□ 0.32
CBX1-202ENST00000393408 GMEB2Q9UKD1 530 aa17.08■□□□□ 0.32
CBX1-202ENST00000393408 A0A0C4DFX4 3053 aa17.08■□□□□ 0.32
CBX1-202ENST00000393408 SPTY2D1-AS1A0A0U1RR47 76 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 SCDO00767 359 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 RENP00797 406 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 CTSEP14091 401 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 KIR3DL2P43630 455 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 PARGQ86W56 976 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 OIT3Q8WWZ8 545 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 RBPMSQ93062 196 aaKnown RBP17.07■□□□□ 0.32
CBX1-202ENST00000393408 MMABQ96EY8 250 aaPredicted RBP17.07■□□□□ 0.32
CBX1-202ENST00000393408 C4orf45Q96LM5 186 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 INTS14Q96SY0 518 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 TMEM184BQ9Y519 407 aaPredicted RBP17.07■□□□□ 0.32
CBX1-202ENST00000393408 TMEM14AQ9Y6G1 99 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 GGT3PA6NGU5 568 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 H3BSH0 61 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 CTAG2O75638 210 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 UTS2O95399 124 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 GPANK1O95872 356 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 CFPP27918 469 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 TACR3P29371 465 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms