RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 MCIDASD6RGH6 385 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 H7C1C5 153 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 SMPD2O60906 423 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 TRMUO75648 421 aaKnown RBP6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 SLC2A10O95528 541 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 BCL10O95999 233 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 WNT11O96014 354 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 QDPRP09417 244 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 CECR9P0C854 216 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 DANCRP0C864 163 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 CD79AP11912 226 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 RHCEP18577 417 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 PTAFRP25105 342 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 CALCRP30988 508 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 IFNA8P32881 189 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 IDH3GP51553 393 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 SH3BGRP55822 239 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 CLRN1P58418 232 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 LCN6P62502 163 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 RPS4XP62701 263 aaKnown RBP6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 ADAM8P78325 824 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 NKX6-1P78426 367 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 MS4A2Q01362 244 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 SPIBQ01892 262 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 FMODQ06828 376 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 NPRL3Q12980 569 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 PGGHGQ32M88 737 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 ALG10Q5BKT4 473 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 Q5PR19 223 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 LRFN4Q6PJG9 635 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 SPNS3Q6ZMD2 512 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF813Q6ZN06 617 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 TRPM8Q7Z2W7 1104 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 OAFQ86UD1 273 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 MDP1Q86V88 176 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF611Q8N823 705 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 LRRC75AQ8NAA5 344 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 NOXO1Q8NFA2 376 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 OR6X1Q8NH79 312 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 FGFBP3Q8TAT2 258 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 SMAP2Q8WU79 429 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 LIPHQ8WWY8 451 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 IGFBPL1Q8WX77 278 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 HDAC2Q92769 488 aaKnown RBP6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 MCHR2Q969V1 340 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF566Q969W8 418 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 SLC25A44Q96H78 314 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 SLC38A2Q96QD8 506 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 TSPAN32Q96QS1 320 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 SEPHS2Q99611 448 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 PIP5K1AQ99755 562 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 GPA33Q99795 319 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 FOXB1Q99853 325 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 SH3GL3Q99963 347 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 B3GAT2Q9NPZ5 323 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 BEX4Q9NWD9 120 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 NDE1Q9NXR1 346 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 GLTPQ9NZD2 209 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF224Q9NZL3 707 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 EDARQ9UNE0 448 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 POFUT2Q9Y2G5 429 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 HIF3AQ9Y2N7 669 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 ADAM18Q9Y3Q7 739 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 FAM32AQ9Y421 112 aaKnown RBP6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 ATP23Q9Y6H3 246 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 CREBBPQ92793 2442 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 SPG11Q96JI7 2443 aa6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 MAP1AP78559 2803 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P1-201ENST00000393368 A0A1W2PRQ8 180 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 TCRBV5S2A0A599 114 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 IMPA2O14732 288 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 NDUFS7O75251 213 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 IGF2P01344 180 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 CD8AP01732 235 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 IGHG1P01857 330 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 FABP3P05413 133 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 TSPAN19P0C672 248 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 ACADSP16219 412 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 RRM2P31350 389 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 CDAP32320 146 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 ACVR1BP36896 505 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 OMPP47874 163 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 PTDSS1P48651 473 aaKnown RBP6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 SLC9A3P48764 834 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 PTH2RP49190 550 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 ERFP50548 548 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 DAP3P51398 398 aaKnown RBP6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 MNAT1P51948 309 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 CTXN1P60606 82 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 ERVK-25P63136 954 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 DBPQ10586 325 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 PPP1R8Q12972 351 aaKnown RBP6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 DGCR6Q14129 220 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 ARMC4Q5T2S8 1044 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 OTPQ5XKR4 325 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 VHLLQ6RSH7 139 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 SKA3Q8IX90 412 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 OR4K5Q8NGD3 323 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 MAGEE2Q8TD90 523 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 TMEM171Q8WVE6 324 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms