RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 RFC3P40938 356 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 GALK2Q01415 458 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 MYBPHQ13203 477 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 TPBGQ13641 420 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 TMEM164Q5U3C3 297 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 SPINK14Q6IE38 97 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 BEST3Q8N1M1 668 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 ST8SIA1Q92185 356 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 MED30Q96HR3 178 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 TBC1D24Q9ULP9 559 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 TRAPPC4Q9Y296 219 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 AKAP13Q12802 2813 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 IGKV1D-43A0A0B4J1Z2 117 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 NCR1O76036 304 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 DXOO77932 396 aaKnown RBP13.45□□□□□ -0.26
MKS1-202ENST00000393119 MPZL1O95297 269 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 RFPL3SP0C7P2 107 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 MAGEB1P43366 347 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 SLC3A1Q07837 685 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 SGCBQ16585 318 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 MEP1BQ16820 701 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 TMEM44Q2T9K0 475 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 SIGIRRQ6IA17 410 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 ARL9Q6T311 187 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 OPN5Q6U736 354 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 SLC35F2Q8IXU6 374 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 UFD1Q92890 307 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 OR5B2Q96R09 309 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 HES7Q9BYE0 225 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 DEPPQ9NTK1 212 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 BABAM2Q9NXR7 383 aa13.45□□□□□ -0.26
MKS1-202ENST00000393119 A0A1B0GTH9 108 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 A0A1W2PPK0 400 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 IRGMA1A4Y4 181 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 PINLYPA6NC86 204 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 H3BSH0 61 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 CTDSP2O14595 271 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 CDRT1O95170 752 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 IGF2P01344 180 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 CYC1P08574 325 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 TRAPPC2P0DI81 140 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 TRAPPC2BP0DI82 140 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 ENDOUP21128 410 aaKnown RBP13.44□□□□□ -0.26
MKS1-202ENST00000393119 APOBEC1P41238 236 aaKnown RBP13.44□□□□□ -0.26
MKS1-202ENST00000393119 CENPAP49450 140 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 FMODQ06828 376 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 TOMM20Q15388 145 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 TMEM176BQ3YBM2 270 aaPredicted RBP13.44□□□□□ -0.26
MKS1-202ENST00000393119 ACER2Q5QJU3 275 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 FADS6Q8N9I5 356 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 LRFN3Q9BTN0 628 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 CCDC32Q9BV29 185 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 COL25A1Q9BXS0 654 aaPredicted RBP13.44□□□□□ -0.26
MKS1-202ENST00000393119 SH2D2AQ9NP31 389 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 ACOXLQ9NUZ1 547 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 PLA2G3Q9NZ20 509 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 TP53I11O14683 189 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 OR6A2O95222 327 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 IFNGR1P15260 489 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 SDC2P34741 201 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 OR2B6P58173 313 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 GNG2P59768 71 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 SLC22A10Q63ZE4 541 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 LRRC69Q6ZNQ3 347 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 TMEM91Q6ZNR0 172 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 PLCZ1Q86YW0 608 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 OR52N1Q8NH53 320 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 ANGPTL6Q8NI99 470 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 PAQR8Q8TEZ7 354 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 HSD17B8Q92506 261 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 AMELYQ99218 206 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 CNN2Q99439 309 aaKnown RBP13.44□□□□□ -0.26
MKS1-202ENST00000393119 HAO2Q9NYQ3 351 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 PCDHGA1Q9Y5H4 931 aa13.44□□□□□ -0.26
MKS1-202ENST00000393119 MED13Q9UHV7 2174 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 IGLV3-32A0A0A0MS00 114 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 IGHV3-15A0A0B4J1V0 119 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 RAB40ALP0C0E4 278 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 CTLA4P16410 223 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 DEFA1P59665 94 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 DEFA3P59666 94 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 GABREP78334 506 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 OC90Q02509 493 aaPredicted RBP13.43□□□□□ -0.26
MKS1-202ENST00000393119 POU3F1Q03052 451 aaPredicted RBP13.43□□□□□ -0.26
MKS1-202ENST00000393119 YIF1BQ5BJH7 314 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 VASH2Q86V25 355 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 ARIH2OSQ8N7S6 290 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 STK35Q8TDR2 534 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 NKD1Q969G9 470 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 ORAI1Q96D31 301 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 SSR3Q9UNL2 185 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 PEX16Q9Y5Y5 336 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 PRRC2CQ9Y520 2896 aaKnown RBP13.43□□□□□ -0.26
MKS1-202ENST00000393119 LIPT2A6NK58 231 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 ZIC3O60481 467 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 SLC16A7O60669 478 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 GLCEO94923 617 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 HPP00738 406 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 DPP4P27487 766 aa13.43□□□□□ -0.26
MKS1-202ENST00000393119 PSPHP78330 225 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms