RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 HAVCR2Q8TDQ0 301 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 FOXN4Q96NZ1 517 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 SNX18Q96RF0 628 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 AMELYQ99218 206 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 CTRCQ99895 268 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 ANKRD10Q9NXR5 420 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 MRPL39Q9NYK5 338 aaKnown RBP23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 KCNG2Q9UJ96 466 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 SPATA2Q9UM82 520 aa23.08■■□□□ 1.29
SMARCD3-203ENST00000392811 A8MV72 311 aaPredicted RBP23.08■■□□□ 1.28
SMARCD3-203ENST00000392811 IGHMP01871 453 aa23.08■■□□□ 1.28
SMARCD3-203ENST00000392811 TBRG1Q3YBR2 411 aa23.08■■□□□ 1.28
SMARCD3-203ENST00000392811 BICRALQ6AI39 1079 aa23.08■■□□□ 1.28
SMARCD3-203ENST00000392811 OTOSQ8NHW6 89 aa23.08■■□□□ 1.28
SMARCD3-203ENST00000392811 ZNF671Q8TAW3 534 aa23.08■■□□□ 1.28
SMARCD3-203ENST00000392811 LGALS14Q8TCE9 139 aa23.08■■□□□ 1.28
SMARCD3-203ENST00000392811 VSX1Q9NZR4 365 aaPredicted RBP23.08■■□□□ 1.28
SMARCD3-203ENST00000392811 ALPK2Q86TB3 2170 aa23.08■■□□□ 1.28
SMARCD3-203ENST00000392811 PDCD5O14737 125 aa23.07■■□□□ 1.28
SMARCD3-203ENST00000392811 SLC16A7O60669 478 aa23.07■■□□□ 1.28
SMARCD3-203ENST00000392811 HLA-DQA2P01906 255 aa23.07■■□□□ 1.28
SMARCD3-203ENST00000392811 DDOSTP39656 456 aa23.07■■□□□ 1.28
SMARCD3-203ENST00000392811 CENPAP49450 140 aa23.07■■□□□ 1.28
SMARCD3-203ENST00000392811 ARSKQ6UWY0 536 aa23.07■■□□□ 1.28
SMARCD3-203ENST00000392811 LRRC69Q6ZNQ3 347 aa23.07■■□□□ 1.28
SMARCD3-203ENST00000392811 OR5L2Q8NGL0 311 aa23.07■■□□□ 1.28
SMARCD3-203ENST00000392811 OR8K3Q8NH51 312 aa23.07■■□□□ 1.28
SMARCD3-203ENST00000392811 UPRTQ96BW1 309 aa23.07■■□□□ 1.28
SMARCD3-203ENST00000392811 AKIRIN1Q9H9L7 192 aaPredicted RBP23.07■■□□□ 1.28
SMARCD3-203ENST00000392811 HRH3Q9Y5N1 445 aa23.07■■□□□ 1.28
SMARCD3-203ENST00000392811 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 ANKRD61A6NGH8 418 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 ITGA10O75578 1167 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 NAGAP17050 411 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 SUMO3P55854 103 aaPredicted RBP23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 GPR176Q14439 515 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 MELKQ14680 651 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 Q499Y3 187 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 TMEM205Q6UW68 189 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 ZNF433Q8N7K0 673 aaPredicted RBP23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 OR2G2Q8NGZ5 317 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 UBASH3BQ8TF42 649 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 RNF138Q8WVD3 245 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 NSMAFQ92636 917 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 NEK6Q9HC98 313 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 SLCO1C1Q9NYB5 712 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 NUFIP1Q9UHK0 495 aaKnown RBP23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 VDAC3Q9Y277 283 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 IGLV1-36A0A0B4J1U3 117 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 MEN1O00255 615 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 PHYHO14832 338 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 YKT6O15498 198 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 SLC43A1O75387 559 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 CLDN20P56880 219 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 TATDN3Q17R31 274 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 HES5Q5TA89 166 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 ESPNLQ6ZVH7 1005 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 KDM8Q8N371 416 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 SLC7A6Q92536 515 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 ARL5BQ96KC2 179 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 SLC26A1Q9H2B4 701 aa23.06■■□□□ 1.28
SMARCD3-203ENST00000392811 SLC22A23A1A5C7 686 aa23.05■■□□□ 1.28
SMARCD3-203ENST00000392811 TMEM221A6NGB7 291 aa23.05■■□□□ 1.28
SMARCD3-203ENST00000392811 OR4C45A6NMZ5 311 aa23.05■■□□□ 1.28
SMARCD3-203ENST00000392811 IFITM5A6NNB3 132 aa23.05■■□□□ 1.28
SMARCD3-203ENST00000392811 PATE3B3GLJ2 98 aa23.05■■□□□ 1.28
SMARCD3-203ENST00000392811 ZNF593O00488 134 aaPredicted RBP23.05■■□□□ 1.28
SMARCD3-203ENST00000392811 GDF9O60383 454 aa23.05■■□□□ 1.28
SMARCD3-203ENST00000392811 UBL3O95164 117 aa23.05■■□□□ 1.28
SMARCD3-203ENST00000392811 HLA-DOBP13765 273 aa23.05■■□□□ 1.28
SMARCD3-203ENST00000392811 CTLA4P16410 223 aa23.05■■□□□ 1.28
SMARCD3-203ENST00000392811 PRR23CQ6ZRP0 262 aa23.05■■□□□ 1.28
SMARCD3-203ENST00000392811 TTC9Q92623 222 aa23.05■■□□□ 1.28
SMARCD3-203ENST00000392811 PCDHGA9Q9Y5G4 932 aaKnown RBP23.05■■□□□ 1.28
SMARCD3-203ENST00000392811 A0A0C4DFX4 3053 aa23.05■■□□□ 1.28
SMARCD3-203ENST00000392811 TRBV5-5A0A0J9YX44 114 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 AIPO00170 330 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 ZFAND5O76080 213 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 APOBEC1P41238 236 aaKnown RBP23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 SOX2P48431 317 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 AGFG1P52594 562 aaKnown RBP23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 ETFDHQ16134 617 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 OR6S1Q8NH40 331 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 GFM1Q96RP9 751 aaKnown RBP23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 MARVELD1Q9BSK0 173 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 MRPL22Q9NWU5 206 aaKnown RBP23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 KLRF1Q9NZS2 232 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 MYOTQ9UBF9 498 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 HLA-DMAP28067 261 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 FOXF1Q12946 379 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 UBE2NLQ5JXB2 153 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 FAM69BQ5VUD6 431 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 MRPL14Q6P1L8 145 aaKnown RBP23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 LYPD8Q6UX82 237 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 SLC35D2Q76EJ3 337 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 PRSS35Q8N3Z0 413 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 NXPE2Q96DL1 559 aa23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 MRPS7Q9Y2R9 242 aaKnown RBP23.04■■□□□ 1.28
SMARCD3-203ENST00000392811 V9GY05 133 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms