RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 TIMM23BQ5SRD1 257 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 GPR139Q6DWJ6 353 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 ZNF770Q6IQ21 691 aaPredicted RBP5.96□□□□□ -1.46
UBBP1-201ENST00000392399 HMBOX1Q6NT76 420 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 PGBD2Q6P3X8 592 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 SMARCD3Q6STE5 483 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 CD300LDQ6UXZ3 194 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 DPY19L2P2Q6ZN68 376 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 BHLHA15Q7RTS1 189 aaPredicted RBP5.96□□□□□ -1.46
UBBP1-201ENST00000392399 CCDC36Q8IYA8 594 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 C20orf196Q8IYI0 205 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 TMEM123Q8N131 208 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 C17orf78Q8N4C9 275 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 ZNF433Q8N7K0 673 aaPredicted RBP5.96□□□□□ -1.46
UBBP1-201ENST00000392399 ARIH2OSQ8N7S6 290 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 LRRC75AQ8NAA5 344 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 OR6N1Q8NGY5 312 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 MOSPD2Q8NHP6 518 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 MAGEE2Q8TD90 523 aaPredicted RBP5.96□□□□□ -1.46
UBBP1-201ENST00000392399 GIPC3Q8TF64 312 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 SLCO4A1Q96BD0 722 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 MUCL1Q96DR8 90 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 C14orf79Q96F83 325 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 RBP7Q96R05 134 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 GPX7Q96SL4 187 aaPredicted RBP5.96□□□□□ -1.46
UBBP1-201ENST00000392399 MED18Q9BUE0 208 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 EMC6Q9BV81 110 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 DGCR6LQ9BY27 220 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 ACTR6Q9GZN1 396 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 MCCC2Q9HCC0 563 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 MOV10Q9HCE1 1003 aaKnown RBP5.96□□□□□ -1.46
UBBP1-201ENST00000392399 OBP2BQ9NPH6 170 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 NRIP3Q9NQ35 241 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 MED29Q9NX70 200 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 IL20Q9NYY1 176 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 GLTPQ9NZD2 209 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 GRHPRQ9UBQ7 328 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 ZNF346Q9UL40 294 aaKnown RBP5.96□□□□□ -1.46
UBBP1-201ENST00000392399 U3KQV3 271 aa5.96□□□□□ -1.46
UBBP1-201ENST00000392399 ITPR2Q14571 2701 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 TRAV27A0A087WT01 109 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 FAM221AA4D161 298 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 OR5H1A6NKK0 313 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ZNF99A8MXY4 864 aaPredicted RBP5.95□□□□□ -1.46
UBBP1-201ENST00000392399 XKRYO14609 159 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ARPC3O15145 178 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 IDH3BO43837 385 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 UPK3AO75631 287 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 TIPRLO75663 272 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 SERPINI2O75830 405 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 LYZL6O75951 148 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 TXNDC12O95881 172 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 GASTP01350 101 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 IGHV3-9P01782 118 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ITGA5P08648 1049 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 PGA4P0DJD7 388 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 PGA3P0DJD8 388 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ACADSP16219 412 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 COL8A1P27658 744 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 SSTR2P30874 369 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 SDHAP31040 664 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 SLC6A6P31641 620 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 RPL4P36578 427 aaKnown RBP5.95□□□□□ -1.46
UBBP1-201ENST00000392399 RPS6KA3P51812 740 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ZNF133P52736 654 aaPredicted RBP5.95□□□□□ -1.46
UBBP1-201ENST00000392399 CLRN1P58418 232 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ROR2Q01974 943 aaKnown RBP5.95□□□□□ -1.46
UBBP1-201ENST00000392399 CAMK2DQ13557 499 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ATP6AP1Q15904 470 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 GABRA6Q16445 453 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 HIST3H3Q16695 136 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 NRN1LQ496H8 165 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 THEM4Q5T1C6 240 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ARMC4Q5T2S8 1044 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ANKRD16Q6P6B7 361 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 SHQ1Q6PI26 577 aaKnown RBP5.95□□□□□ -1.46
UBBP1-201ENST00000392399 RASSF6Q6ZTQ3 369 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ZNF627Q7L945 461 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.95□□□□□ -1.46
UBBP1-201ENST00000392399 HIPK1Q86Z02 1210 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 CLDN22Q8N7P3 220 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 AQP11Q8NBQ7 271 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 OR10G2Q8NGC3 310 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 OR13C2Q8NGS9 318 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 LINC01560Q8TB33 94 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ASB10Q8WXI3 467 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 DNAJC9Q8WXX5 260 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 TMEM54Q969K7 222 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 WFIKKN1Q96NZ8 548 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 GPA33Q99795 319 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ALG12Q9BV10 488 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 OSBPL10Q9BXB5 764 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 POLDIP3Q9BY77 421 aaKnown RBP5.95□□□□□ -1.46
UBBP1-201ENST00000392399 MRPL13Q9BYD1 178 aaKnown RBP5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ULBP2Q9BZM5 246 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 OR52D1Q9H346 318 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 ZNF556Q9HAH1 456 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 SMURF2Q9HAU4 748 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 CRLF2Q9HC73 371 aa5.95□□□□□ -1.46
UBBP1-201ENST00000392399 GPR35Q9HC97 309 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms