RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 YIPF3Q9GZM5 350 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 C6orf62Q9GZU0 229 aaPredicted RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 DRC3Q9H069 523 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 OR51B5Q9H339 312 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 EURLQ9NYK6 297 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 CD274Q9NZQ7 290 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 EMC3Q9P0I2 261 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 COX16Q9P0S2 106 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 IFT172Q9UG01 1749 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 ADAM28Q9UKQ2 775 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 VANGL2Q9ULK5 521 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 ABCG2Q9UNQ0 655 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 COPS3Q9UNS2 423 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 RIMS2Q9UQ26 1411 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 CACNG2Q9Y698 323 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 TP53BP1Q12888 1972 aaPredicted RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 MAP2P11137 1827 aaKnown RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 PBRM1Q86U86 1689 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 PREX1Q8TCU6 1659 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 QRICH2Q9H0J4 1663 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 CARMIL3Q8ND23 1372 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 MED23Q9ULK4 1368 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 ZNFX1Q9P2E3 1918 aaKnown RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 N4BP2Q86UW6 1770 aaPredicted RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 CAMSAP1Q5T5Y3 1602 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 MAP3K15Q6ZN16 1313 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 DAPK1P53355 1430 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 SMIM31A0A1B0GVY4 71 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 GOLGA8IPA6NC78 632 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 EFCAB10A6NFE3 127 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 PCP4L1A6NKN8 68 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 SNTNA6NMZ2 147 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 KLLNB2CW77 178 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 E9PBE3 544 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 DCTN6O00399 190 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 SLC9A3R1O14745 358 aaPredicted RBP2.2□□□□□ -2.06
PTPRC-205ENST00000391970 CASC3O15234 703 aaKnown RBP2.2□□□□□ -2.06
PTPRC-205ENST00000391970 POLR2DO15514 142 aaKnown RBP2.2□□□□□ -2.06
PTPRC-205ENST00000391970 MED7O43513 233 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 ATP5LO75964 103 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 ATP6V1G2O95670 118 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 LGI1O95970 557 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 HLA-DRAP01903 254 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 CLTAP09496 248 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 CCDC130P13994 396 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 NPR2P20594 1047 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 GNA11P29992 359 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 CCR1P32246 355 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 UGT1A5P35504 534 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 CRYBB1P53674 252 aaPredicted RBP2.2□□□□□ -2.06
PTPRC-205ENST00000391970 AP1S2P56377 157 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 STX17P56962 302 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 MAP3K7CLP57077 242 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 RPL26P61254 145 aaKnown RBP2.2□□□□□ -2.06
PTPRC-205ENST00000391970 LYZP61626 148 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 CCNA1P78396 465 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 TNFRSF17Q02223 184 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 ASPHQ12797 758 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 KLHL38Q2WGJ6 581 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 NSUN5P1Q3KNT7 163 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 CCDC58Q4VC31 144 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 CARD16Q5EG05 197 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 OR2G6Q5TZ20 316 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 PRMT9Q6P2P2 845 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 IDO2Q6ZQW0 420 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 GDPD3Q7L5L3 318 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 FAM220AQ7Z4H9 259 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 DHDDSQ86SQ9 333 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 VRK2Q86Y07 508 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 TGIF2LYQ8IUE0 185 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 BBS5Q8N3I7 341 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 TMEM252Q8N6L7 170 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 ZNF565Q8N9K5 539 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 TRPV1Q8NER1 839 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 TTLQ8NG68 377 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 OR2AP1Q8NGE2 309 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 LINC01006Q8NI28 216 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 C7orf33Q8WU49 177 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 SCFD1Q8WVM8 642 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 UBE2E3Q969T4 207 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 CIDECQ96AQ7 238 aaPredicted RBP2.2□□□□□ -2.06
PTPRC-205ENST00000391970 SEC22AQ96IW7 307 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 CEP170P1Q96L14 293 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 RNF2Q99496 336 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 COPS8Q99627 209 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 EBF4Q9BQW3 602 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 GON7Q9BXV9 100 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 LHX5Q9H2C1 402 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 ZDHHC11Q9H8X9 412 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 VPS37BQ9H9H4 285 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 FN3KRPQ9HA64 309 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 CRLF2Q9HC73 371 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 MCCC2Q9HCC0 563 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 TM9SF3Q9HD45 589 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 PLSCR3Q9NRY6 295 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 IL17CQ9P0M4 197 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 CD300AQ9UGN4 299 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 PIGLQ9Y2B2 252 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 IFT52Q9Y366 437 aa2.2□□□□□ -2.06
PTPRC-205ENST00000391970 UGT2A1Q9Y4X1 527 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms