RNA–Protein interactions for RNA: ENST00000391096.1

RNU6-1248P-201, Transcript of RNA, U6 small nuclear 1248, pseudogene, humanhuman

BASIC

Gene RNU6-1248P, Length 64 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1248P-201ENST00000391096 SGK3Q96BR1 496 aa0.43□□□□□ -2.34
RNU6-1248P-201ENST00000391096 REEP4Q9H6H4 257 aa0.43□□□□□ -2.34
RNU6-1248P-201ENST00000391096 RANBP3Q9H6Z4 567 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1248P-201ENST00000391096 RAB18Q9NP72 206 aa0.43□□□□□ -2.34
RNU6-1248P-201ENST00000391096 GIN1Q9NXP7 522 aa0.43□□□□□ -2.34
RNU6-1248P-201ENST00000391096 KCNIP1Q9NZI2 227 aa0.43□□□□□ -2.34
RNU6-1248P-201ENST00000391096 PACSIN2Q9UNF0 486 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1248P-201ENST00000391096 POLDIP2Q9Y2S7 368 aa0.43□□□□□ -2.34
RNU6-1248P-201ENST00000391096 MRPS18BQ9Y676 258 aaKnown RBP0.43□□□□□ -2.34
RNU6-1248P-201ENST00000391096 MSH6P52701 1360 aa0.43□□□□□ -2.34
RNU6-1248P-201ENST00000391096 TCRBV9S1A1TA0A576 114 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 ZNF716A6NP11 495 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 ZNF878C9JN71 531 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 J3QKU1 62 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 XKRYO14609 159 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 KMOO15229 486 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 UTS2O95399 124 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CD74P04233 296 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 ZNF806P0C7X5 589 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CYP2F1P24903 491 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 GCAP28676 217 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CA8P35219 290 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CXCL12P48061 93 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CSNK1A1P48729 337 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 GDI2P50395 445 aaKnown RBP0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CCR8P51685 355 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 ZNF138P52744 262 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CRISP1P54107 249 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CDH4P55283 916 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 ERCC8Q13216 396 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 GANABQ14697 944 aaKnown RBP0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 ZBED5Q49AG3 693 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CNIH2Q6PI25 160 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 SMARCD3Q6STE5 483 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 TMEM136Q6ZRR5 245 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 MOB3BQ86TA1 216 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 IPMKQ8NFU5 416 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 OR4D5Q8NGN0 318 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 LINC01560Q8TB33 94 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 RTN4IP1Q8WWV3 396 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CCDC43Q96MW1 224 aaKnown RBP0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 FICDQ9BVA6 458 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 MRPL37Q9BZE1 423 aaKnown RBP0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 ELOVL3Q9HB03 270 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 HMG20AQ9NP66 347 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 GPATCH2LQ9NWQ4 482 aa0.42□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CENPJQ9HC77 1338 aaPredicted RBP0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 HIP1O00291 1037 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 RGS16O15492 202 aaPredicted RBP0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 PRKAB2O43741 272 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CHST1O43916 411 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 UPK3AO75631 287 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 YIF1AO95070 293 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 GABARAPO95166 117 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 APCSP02743 223 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 GAPDHP04406 335 aaKnown RBP0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CDKN2BP42772 138 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 GPR6P46095 362 aaPredicted RBP0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CAMLGP49069 296 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CYB561P49447 251 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 RBX1P62877 108 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 KLRB1Q12918 225 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 PDZK1IP1Q13113 114 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 IRF4Q15306 451 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 ZFP1Q6P2D0 407 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 KCNIP4Q6PIL6 250 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 ADM2Q7Z4H4 148 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 EGFL6Q8IUX8 553 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 SPANXA2-OT1Q8N9U9 137 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 C1orf64Q8NEQ6 169 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 STXBP6Q8NFX7 210 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 OR4K5Q8NGD3 323 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 OR6N1Q8NGY5 312 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 UFD1Q92890 307 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 SH3YL1Q96HL8 342 aaPredicted RBP0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 SHANK2-AS3Q9BTD1 123 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 SAV1Q9H4B6 383 aaPredicted RBP0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 SYNDIG1Q9H7V2 258 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 SAMSN1Q9NSI8 373 aaKnown RBP0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 KLHL28Q9NXS3 571 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 CDH9Q9ULB4 789 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 PIN4Q9Y237 131 aaKnown RBP0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 MFHAS1Q9Y4C4 1052 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 TIMM10BQ9Y5J6 103 aa0.41□□□□□ -2.34
RNU6-1248P-201ENST00000391096 SF3B1O75533 1304 aaKnown RBP eCLIP0.4□□□□□ -2.34
RNU6-1248P-201ENST00000391096 RGSL1A5PLK6 1076 aa0.4□□□□□ -2.35
RNU6-1248P-201ENST00000391096 C5orf63A6NC05 138 aa0.4□□□□□ -2.35
RNU6-1248P-201ENST00000391096 TRIM64A6NGJ6 449 aa0.4□□□□□ -2.35
RNU6-1248P-201ENST00000391096 TRIM64BA6NI03 449 aa0.4□□□□□ -2.35
RNU6-1248P-201ENST00000391096 HIDE1A8MVS5 230 aa0.4□□□□□ -2.35
RNU6-1248P-201ENST00000391096 H0YJW9 148 aa0.4□□□□□ -2.35
RNU6-1248P-201ENST00000391096 C3orf84H3BNL1 204 aa0.4□□□□□ -2.35
RNU6-1248P-201ENST00000391096 PRRG1O14668 218 aa0.4□□□□□ -2.35
RNU6-1248P-201ENST00000391096 LRATO95237 230 aa0.4□□□□□ -2.35
RNU6-1248P-201ENST00000391096 OXSR1O95747 527 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1248P-201ENST00000391096 AP2A1O95782 977 aa0.4□□□□□ -2.35
RNU6-1248P-201ENST00000391096 HLA-DQA1P01909 254 aa0.4□□□□□ -2.35
RNU6-1248P-201ENST00000391096 MT-ND3P03897 115 aa0.4□□□□□ -2.35
RNU6-1248P-201ENST00000391096 IL4P05112 153 aa0.4□□□□□ -2.35
RNU6-1248P-201ENST00000391096 IMPDH1P20839 514 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms