RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 OR4S2Q8NH73 311 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 LINC01560Q8TB33 94 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 LKAAEAR1Q8TD35 194 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 PYROXD1Q8WU10 500 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 UFD1Q92890 307 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 STMN2Q93045 179 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 CCDC47Q96A33 483 aaKnown RBP0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 CREB3L1Q96BA8 519 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 TTC25Q96NG3 672 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 GPA33Q99795 319 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 RNF5Q99942 180 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 KCTD14Q9BQ13 255 aaPredicted RBP0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 TM2D3Q9BRN9 247 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 TIMM29Q9BSF4 260 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 C1orf50Q9BV19 199 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 EDEM2Q9BV94 578 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 ZNF416Q9BWM5 594 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 SLC25A2Q9BXI2 301 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 CAPS2Q9BXY5 557 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 DPH5Q9H2P9 285 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 SGK2Q9HBY8 427 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 KLHL28Q9NXS3 571 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 HOXC10Q9NYD6 342 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 ZNF639Q9UID6 485 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 CDH9Q9ULB4 789 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 MMP17Q9ULZ9 603 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 NOL7Q9UMY1 257 aaKnown RBP0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 OR10H1Q9Y4A9 318 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 IKBKGQ9Y6K9 419 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 NCAPD2Q15021 1401 aa0.55□□□□□ -2.32
SNORD28B-201ENST00000390993 FRMPD3Q5JV73 1810 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 ARPC4-TTLL3A0A0A6YYG9 625 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 TCRBV9S1A1TA0A576 114 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 OR6C70A6NIJ9 312 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 ZNF98A6NK75 572 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 OR5B21A6NL26 309 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 BPY2O14599 106 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 POLR1CO15160 346 aaPredicted RBP0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 MAPK13O15264 365 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 TOM1O60784 492 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 UPK3AO75631 287 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 ATP5LO75964 103 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 SCGNO76038 276 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 MBD3O95983 291 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 APCSP02743 223 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 ZNF688P0C7X2 276 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 UBTFL6P0CB48 400 aaPredicted RBP0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 STMN1P16949 149 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 PCMT1P22061 227 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 GNA11P29992 359 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 DDOSTP39656 456 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 GPR6P46095 362 aaPredicted RBP0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 CXCL12P48061 93 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 GSSP48637 474 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 SLC11A1P49279 550 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 RPS21P63220 83 aaKnown RBP0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 ZNF616Q08AN1 781 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 AP1B1Q10567 949 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 FUT5Q11128 374 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 PDZK1IP1Q13113 114 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 SCGB2A2Q13296 93 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 OR5I1Q13606 314 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 VGLL4Q14135 290 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 GANABQ14697 944 aaKnown RBP0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 KRTAP13-4Q3LI77 160 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 KCTD21Q4G0X4 260 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 TMEM41BQ5BJD5 291 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 VAX1Q5SQQ9 334 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 C10orf120Q5SQS8 335 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 OR2A2Q6IF42 318 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 ZFP1Q6P2D0 407 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 SASS6Q6UVJ0 657 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 Q6ZS52 159 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 HDDC2Q7Z4H3 204 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 NUDCD3Q8IVD9 361 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 OR2L13Q8N349 312 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 ZNF664Q8N3J9 261 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 NOXO1Q8NFA2 376 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 OR5D13Q8NGL4 314 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 SHC3Q92529 594 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 FGF14Q92915 247 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 SGK3Q96BR1 496 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 FAM111AQ96PZ2 611 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 TESK2Q96S53 571 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 STACQ99469 402 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 RNF2Q99496 336 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 KLF6Q99612 283 aaPredicted RBP0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 OMDQ99983 421 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 CHAC1Q9BUX1 264 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 MRPL13Q9BYD1 178 aaKnown RBP0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 C1orf198Q9H425 327 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 C12orf10Q9HB07 376 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 PARP11Q9NR21 331 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 FBXO6Q9NRD1 293 aaPredicted RBP0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 FARSBQ9NSD9 589 aaKnown RBP0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 IL36GQ9NZH8 169 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 UVRAGQ9P2Y5 699 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 KNSTRNQ9Y448 316 aa0.54□□□□□ -2.32
SNORD28B-201ENST00000390993 COL27A1Q8IZC6 1860 aaPredicted RBP0.53□□□□□ -2.32
SNORD28B-201ENST00000390993 TRAV39A0A0B4J263 110 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms