RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 FGF14Q92915 247 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 MRPL38Q96DV4 380 aaKnown RBP15.74■□□□□ 0.11
SGCB-201ENST00000381431 LINC00615Q96LM1 132 aaPredicted RBP15.74■□□□□ 0.11
SGCB-201ENST00000381431 NRTNQ99748 197 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 FAM86C1Q9NVL1 165 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 NPAP1Q9NZP6 1156 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 SERGEFQ9UGK8 458 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 GLS2Q9UI32 602 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 ZNF749O43361 778 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 CSF3P09919 207 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 CDK2P24941 298 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 OR4K15Q8NH41 348 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 C16orf52Q8NHV5 167 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 ZFPM2Q8WW38 1151 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 ENY2Q9NPA8 101 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 ING1Q9UK53 422 aaPredicted RBP15.74■□□□□ 0.11
SGCB-201ENST00000381431 GPR55Q9Y2T6 319 aaPredicted RBP15.74■□□□□ 0.11
SGCB-201ENST00000381431 TRIOBPQ9H2D6 2365 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 A8MVM7 634 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 SIGLEC6O43699 453 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 EVX1P49640 407 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 ECH1Q13011 328 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 C1orf140Q5VVS0 124 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 DCXRQ7Z4W1 244 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 ZNF679Q8IYX0 411 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 TEX19Q8NA77 164 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 RADILQ96JH8 1075 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 BPNT1O95861 308 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 SERPINE2P07093 398 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 FOSL2P15408 326 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 SPI1P17947 270 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 ANXA7P20073 488 aaKnown RBP15.74■□□□□ 0.11
SGCB-201ENST00000381431 TEKQ02763 1124 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 LILRA6Q6PI73 481 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 GLCCI1Q86VQ1 547 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 NAT6Q93015 286 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 RAB3CQ96E17 227 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 ZNF845Q96IR2 970 aaPredicted RBP15.74■□□□□ 0.11
SGCB-201ENST00000381431 OR11A1Q9GZK7 315 aa15.74■□□□□ 0.11
SGCB-201ENST00000381431 TPT1P13693 172 aaKnown RBP15.73■□□□□ 0.11
SGCB-201ENST00000381431 BLVRBP30043 206 aaPredicted RBP15.73■□□□□ 0.11
SGCB-201ENST00000381431 DDOSTP39656 456 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 MTCP1P56278 107 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 HEPHL1Q6MZM0 1159 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 BAHD1Q8TBE0 780 aaPredicted RBP15.73■□□□□ 0.11
SGCB-201ENST00000381431 DUSP6Q16828 381 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 MANEAQ5SRI9 462 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 ZNF793Q6ZN11 406 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 SNIP1Q8TAD8 396 aaKnown RBP15.73■□□□□ 0.11
SGCB-201ENST00000381431 TSLPQ969D9 159 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 ARHGAP9Q9BRR9 750 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 C20orf85Q9H1P6 137 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 PTTG3PQ9NZH4 202 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 A4GNTQ9UNA3 340 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 CNOT1A5YKK6 2376 aaKnown RBP15.73■□□□□ 0.11
SGCB-201ENST00000381431 KCNE1BA0A087WTH5 132 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 FADS1O60427 444 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 ZNF44P15621 663 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 ZNF529Q6P280 563 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 SLC16A9Q7RTY1 509 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 CCDC71Q8IV32 467 aaPredicted RBP15.73■□□□□ 0.11
SGCB-201ENST00000381431 GPR32P1Q8NGA4 272 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 OR51S1Q8NGJ8 323 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 TSPAN10Q9H1Z9 355 aaPredicted RBP15.73■□□□□ 0.11
SGCB-201ENST00000381431 ZNF576Q9H609 170 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 ANKRD10Q9NXR5 420 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 PISDQ9UG56 409 aa15.73■□□□□ 0.11
SGCB-201ENST00000381431 ADAM23O75077 832 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 HOXC8P31273 242 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 CX3CR1P49238 355 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 TRIP12Q14669 1992 aaPredicted RBP15.72■□□□□ 0.11
SGCB-201ENST00000381431 FAAP20Q6NZ36 180 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 C10orf111Q8N326 155 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 GCDHQ92947 438 aaPredicted RBP15.72■□□□□ 0.11
SGCB-201ENST00000381431 CNTNAP3BQ96NU0 1288 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 NEURL2Q9BR09 285 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 TMEM43Q9BTV4 400 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 CCDC86Q9H6F5 360 aaKnown RBP15.72■□□□□ 0.11
SGCB-201ENST00000381431 HS3ST3A1Q9Y663 406 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 ANKRD33BA6NCL7 494 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 FTCDNL1E5RQL4 147 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 SURF4O15260 269 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 AKR7A3O95154 331 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 OLFM2O95897 454 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 FCGR2AP12318 317 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 POU3F2P20265 443 aaPredicted RBP15.72■□□□□ 0.11
SGCB-201ENST00000381431 RAB5BP61020 215 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 ARF1P84077 181 aaKnown RBP15.72■□□□□ 0.11
SGCB-201ENST00000381431 CMTM1Q8IZ96 169 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 CCDC71LQ8N9Z2 235 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 PBDC1Q9BVG4 233 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 NEU3Q9UQ49 428 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 UNC13CQ8NB66 2214 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 USF2Q15853 346 aaPredicted RBP15.72■□□□□ 0.11
SGCB-201ENST00000381431 RNF170Q96K19 258 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 CMSS1Q9BQ75 279 aaKnown RBP15.72■□□□□ 0.11
SGCB-201ENST00000381431 DUSP23Q9BVJ7 150 aa15.72■□□□□ 0.11
SGCB-201ENST00000381431 MRPS28Q9Y2Q9 187 aaKnown RBP15.72■□□□□ 0.11
SGCB-201ENST00000381431 A6NCN8 305 aa15.71■□□□□ 0.11
SGCB-201ENST00000381431 VSTM5A8MXK1 200 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms