RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 RPS15AP62244 130 aaKnown RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 HTD2P86397 168 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 TRIM61Q5EBN2 209 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 LDLRAD1Q5T700 205 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 CEACAM20Q6UY09 585 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 MDGA2Q7Z553 956 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SLC35F2Q8IXU6 374 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 OR10G4Q8NGN3 311 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 TFGQ92734 400 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 RNF170Q96K19 258 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF649Q9BS31 505 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 AJAP1Q9UKB5 411 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 FZD7O75084 574 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 NIPSNAP2O75323 286 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 MT-ATP6P00846 226 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 LINC00614P0C842 121 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 PGGHGQ32M88 737 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 YOD1Q5VVQ6 348 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 FCRL6Q6DN72 434 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 C17orf99Q6UX52 265 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 TMPPEQ6ZT21 453 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 UBE3DQ7Z6J8 389 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ANKRD46Q86W74 232 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 C9orf62Q8N4C0 152 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 METTL27Q8N6F8 245 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 NETO2Q8NC67 525 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 EMG1Q92979 244 aaKnown RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 PRR14Q9BWN1 585 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 HAO2Q9NYQ3 351 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 V9GY05 133 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 A0A087WWC5 75 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 C7orf72A4D263 438 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 A6NL46 340 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ANGPTL7O43827 346 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 OR4E1P0C645 316 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 IRF2P14316 349 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 BTF3P20290 206 aaKnown RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 PCMT1P22061 227 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 LMO2P25791 158 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 AHRP35869 848 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 UFM1P61960 85 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SEMG2Q02383 582 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ECH1Q13011 328 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ENDOGQ14249 297 aaKnown RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SLC10A6Q3KNW5 377 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 PPM1JQ5JR12 505 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 TMEM198Q66K66 360 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF343Q6P1L6 599 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 CLEC20AQ6ZU45 233 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 LILRA2Q8N149 483 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 OR4B1Q8NGF8 309 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SPACA1Q9HBV2 294 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 RLIMQ9NVW2 624 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 PARPBPQ9NWS1 579 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 YJEFN3A6XGL0 299 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 GABRPO00591 440 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SCO1O75880 301 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 OR4F21O95013 312 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SERPINA7P05543 415 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 TFPTP0C1Z6 253 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SFTPDP35247 375 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 DAP3P51398 398 aaKnown RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SHEQ5VZ18 495 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 B3GNT9Q6UX72 402 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SLC16A12Q6ZSM3 486 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 TTLL10Q6ZVT0 673 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ZBTB46Q86UZ6 589 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 PYROXD2Q8N2H3 581 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 CISD2Q8N5K1 135 aaKnown RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 OR9K2Q8NGE7 335 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 MED12Q93074 2177 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SMIM19Q96E16 107 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 WDR34Q96EX3 536 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 CMKLR1Q99788 373 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 PRRX2Q99811 253 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 METTL17Q9H7H0 456 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 UBQLN4Q9NRR5 601 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ERVK13-1Q9NX77 482 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 LCTP09848 1927 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 A0A1B0GV72 72 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SEMG1P04279 462 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 CD3GP09693 182 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 C1orf61Q13536 156 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 HTR4Q13639 388 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 RNASE12Q5GAN4 147 aaKnown RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SLC16A14Q7RTX9 510 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SLC35E3Q7Z769 313 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF101Q8IZC7 436 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 POGLUT1Q8NBL1 392 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 RELTQ969Z4 430 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SLC35B3Q9H1N7 401 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 MIXL1Q9H2W2 232 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 CKAP5Q14008 2032 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 F6UZH7 168 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 TMEM189-UBE2V1I3L0A0 370 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 RTCAO00442 366 aaKnown RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 BCAT2O15382 392 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 HPGDSO60760 199 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 NDUFB6O95139 128 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SULT1A3P0DMM9 295 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms