RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 MBOAT2Q6ZWT7 520 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 LINGO2Q7L985 606 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 BIVMQ86UB2 503 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 P2RY8Q86VZ1 359 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 DHFR2Q86XF0 187 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 C20orf196Q8IYI0 205 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 TMEM123Q8N131 208 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 C1orf162Q8NEQ5 155 aaPredicted RBP8.1□□□□□ -1.11
HMGN1-202ENST00000380747 OR1K1Q8NGR3 316 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 OR52J3Q8NH60 311 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 MOSPD2Q8NHP6 518 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 CCDC124Q96CT7 223 aaKnown RBP8.1□□□□□ -1.11
HMGN1-202ENST00000380747 CLPTM1LQ96KA5 538 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 C7orf34Q96L11 122 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 LRGUKQ96M69 825 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 MUS81Q96NY9 551 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 SEPHS2Q99611 448 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 PIP5K1AQ99755 562 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 C1QTNF6Q9BXI9 259 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 C1orf21Q9H246 121 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 MUC13Q9H3R2 512 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 ANKRD19PQ9H560 264 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 ESRP2Q9H6T0 727 aaKnown RBP8.1□□□□□ -1.11
HMGN1-202ENST00000380747 PLEKHF2Q9H8W4 249 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 UBTD1Q9HAC8 227 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 CRLF2Q9HC73 371 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 GPR35Q9HC97 309 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 B3GAT2Q9NPZ5 323 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 SLC17A5Q9NRA2 495 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 INIPQ9NRY2 104 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 CCM2LQ9NUG4 571 aaPredicted RBP8.1□□□□□ -1.11
HMGN1-202ENST00000380747 ACTR3BQ9P1U1 418 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 ST6GALNAC2Q9UJ37 374 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 EDARQ9UNE0 448 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 PLEKHA6Q9Y2H5 1048 aa8.1□□□□□ -1.11
HMGN1-202ENST00000380747 MXRA5Q9NR99 2828 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 A0A1W2PRG6 482 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 HTR3EA5X5Y0 456 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 MCIDASD6RGH6 385 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 M0R1B8 84 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 CLOCKO15516 846 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 GADD45GO95257 159 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 BCL10O95999 233 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 PLAUP00749 431 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 SEMG1P04279 462 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 CD3EP07766 207 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 MAKP20794 623 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 DNASE1P24855 282 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 LOXP28300 417 aaPredicted RBP8.09□□□□□ -1.11
HMGN1-202ENST00000380747 CSNK1A1P48729 337 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 SMIM11AP58511 58 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 PRPS1P60891 318 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 UBE2NP61088 152 aaKnown RBP8.09□□□□□ -1.11
HMGN1-202ENST00000380747 PRKCDQ05655 676 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 TRIM25Q14258 630 aaKnown RBP8.09□□□□□ -1.11
HMGN1-202ENST00000380747 CEACAM16Q2WEN9 425 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 TBRG1Q3YBR2 411 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 DNAL1Q4LDG9 190 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 PHYHD1Q5SRE7 291 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 NCMAPQ5T1S8 102 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 PAMR1Q6UXH9 720 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 TREML4Q6UXN2 200 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 NHLRC1Q6VVB1 395 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 ZNF704Q6ZNC4 412 aaPredicted RBP8.09□□□□□ -1.11
HMGN1-202ENST00000380747 SSX8Q7RTT4 187 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 IGFN1Q86VF2 1251 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 ZDHHC21Q8IVQ6 265 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 WDFY1Q8IWB7 410 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 RNF113BQ8IZP6 322 aaKnown RBP8.09□□□□□ -1.11
HMGN1-202ENST00000380747 C17orf78Q8N4C9 275 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 WDR31Q8NA23 367 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 OR13C2Q8NGS9 318 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 OR51A7Q8NH64 312 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 SLC7A13Q8TCU3 470 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 LIPHQ8WWY8 451 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 MBD6Q96DN6 1003 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 ADAD1Q96M93 576 aaKnown RBP8.09□□□□□ -1.11
HMGN1-202ENST00000380747 ULBP2Q9BZM5 246 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 TRIM15Q9C019 465 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 GSX1Q9H4S2 264 aaPredicted RBP8.09□□□□□ -1.11
HMGN1-202ENST00000380747 POFUT2Q9Y2G5 429 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 AMDHD2Q9Y303 409 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 SLC25A15Q9Y619 301 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 TLN2Q9Y4G6 2542 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 FBN1P35555 2871 aaKnown RBP8.09□□□□□ -1.11
HMGN1-202ENST00000380747 NBEAL1Q6ZS30 2694 aa8.09□□□□□ -1.11
HMGN1-202ENST00000380747 TRAV27A0A087WT01 109 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 TRBV4-1A0A0J9YWV2 114 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 A0A1W2PRQ8 180 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 DPRXA6NFQ7 191 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 SEC14L2O76054 403 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 WNT11O96014 354 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 RAF1P04049 648 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 EPHA1P21709 976 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 RRM2P31350 389 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 DAP3P51398 398 aaKnown RBP8.08□□□□□ -1.12
HMGN1-202ENST00000380747 SH3BGRP55822 239 aaPredicted RBP8.08□□□□□ -1.12
HMGN1-202ENST00000380747 CLRN1P58418 232 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 TUBA1BP68363 451 aa8.08□□□□□ -1.12
HMGN1-202ENST00000380747 TUBA4AP68366 448 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms