RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 EGR3Q06889 387 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 COL28A1Q2UY09 1125 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 SLC25A35Q3KQZ1 300 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 TBRG1Q3YBR2 411 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 ESCO2Q56NI9 601 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 PWWP2BQ6NUJ5 590 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 NOXA1Q86UR1 476 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 PPP1R3BQ86XI6 285 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 OR6V1Q8N148 313 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 YIPF7Q8N8F6 280 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 NFAM1Q8NET5 270 aaPredicted RBP11.42□□□□□ -0.58
VPS16-202ENST00000380445 OR4M1Q8NGD0 313 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 OR6S1Q8NH40 331 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 EDAQ92838 391 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 PTDSS2Q9BVG9 487 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 GON7Q9BXV9 100 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 HDHD2Q9H0R4 259 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 NUP50Q9UKX7 468 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 FKBP7Q9Y680 259 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 CABIN1Q9Y6J0 2220 aa11.42□□□□□ -0.58
VPS16-202ENST00000380445 LY6G6EA0A0G2JKS1 128 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 FAM240BA0A1B0GVZ2 78 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 C11orf98E9PRG8 122 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 NOS1APO75052 506 aaPredicted RBP11.41□□□□□ -0.58
VPS16-202ENST00000380445 FZD7O75084 574 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 DXOO77932 396 aaKnown RBP11.41□□□□□ -0.58
VPS16-202ENST00000380445 EIF4EP06730 217 aaKnown RBP11.41□□□□□ -0.58
VPS16-202ENST00000380445 CYC1P08574 325 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 AHCYP23526 432 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 GRPRP30550 384 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 MFSD13AQ14CX5 517 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 ZNF57Q68EA5 555 aaPredicted RBP11.41□□□□□ -0.58
VPS16-202ENST00000380445 PAPD4Q6PIY7 484 aaKnown RBP11.41□□□□□ -0.58
VPS16-202ENST00000380445 ZNF248Q8NDW4 579 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 OR4M2Q8NGB6 313 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 CCDC120Q96HB5 630 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 CCDC74BQ96LY2 380 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 INTS14Q96SY0 518 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 SYT4Q9H2B2 425 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 C19orf25Q9UFG5 118 aaPredicted RBP11.41□□□□□ -0.58
VPS16-202ENST00000380445 U3KQA8 63 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 FER1L5A0AVI2 2057 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 A0A1W2PPK0 400 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 ANKUB1A6NFN9 424 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 C19orf67A6NJJ6 358 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 DCTN6O00399 190 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 ITGA10O75578 1167 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 ZNF432O94892 652 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 PSKH1P11801 424 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 ALKBH1Q13686 389 aaKnown RBP11.41□□□□□ -0.58
VPS16-202ENST00000380445 C1QL3Q5VWW1 255 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 BAIAP2L2Q6UXY1 529 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 OR6N2Q8NGY6 317 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 PIGKQ92643 395 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 RFT1Q96AA3 541 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 TXNIPQ9H3M7 391 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 SPATA2Q9UM82 520 aa11.41□□□□□ -0.58
VPS16-202ENST00000380445 VSTM2BA6NLU5 285 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 C4orf47A7E2U8 309 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 H7C1C5 153 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 TIAF1O95411 115 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 PAHP00439 452 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 ATF4P18848 351 aaPredicted RBP11.4□□□□□ -0.58
VPS16-202ENST00000380445 LCN6P62502 163 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 LIPNQ5VXI9 398 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 IL20RBQ6UXL0 311 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 PM20D2Q8IYS1 436 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 OR5AK2Q8NH90 309 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 RNF170Q96K19 258 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 THAP7Q9BT49 309 aaPredicted RBP11.4□□□□□ -0.58
VPS16-202ENST00000380445 WACQ9BTA9 647 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 MRI1Q9BV20 369 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 SLITRK2Q9H156 845 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 NOX4Q9NPH5 578 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 BRD7Q9NPI1 651 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 IKZF2Q9UKS7 526 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 CACNA1EQ15878 2313 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 PRSS37A4D1T9 235 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 PSMD9O00233 223 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 ZFPL1O95159 310 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 ALOX5APP20292 161 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 APOBEC1P41238 236 aaKnown RBP11.4□□□□□ -0.58
VPS16-202ENST00000380445 ACKR1Q16570 336 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 CPEB2Q7Z5Q1 589 aaKnown RBP11.4□□□□□ -0.58
VPS16-202ENST00000380445 ZNF671Q8TAW3 534 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 CCDC86Q9H6F5 360 aaKnown RBP11.4□□□□□ -0.58
VPS16-202ENST00000380445 GAREM1Q9H706 876 aa11.4□□□□□ -0.58
VPS16-202ENST00000380445 MRPL39Q9NYK5 338 aaKnown RBP11.4□□□□□ -0.58
VPS16-202ENST00000380445 MRM2Q9UI43 246 aaKnown RBP11.4□□□□□ -0.58
VPS16-202ENST00000380445 COL6A3P12111 3177 aa11.4□□□□□ -0.59
VPS16-202ENST00000380445 TRBV11-1A0A0K0K1C0 115 aa11.39□□□□□ -0.59
VPS16-202ENST00000380445 TVP23AA6NH52 213 aa11.39□□□□□ -0.59
VPS16-202ENST00000380445 C17orf51A8MQB3 221 aa11.39□□□□□ -0.59
VPS16-202ENST00000380445 ATP6V1G2-DDX39BF2Z307 99 aa11.39□□□□□ -0.59
VPS16-202ENST00000380445 UPK3AO75631 287 aa11.39□□□□□ -0.59
VPS16-202ENST00000380445 SCO1O75880 301 aa11.39□□□□□ -0.59
VPS16-202ENST00000380445 RPP14O95059 124 aaKnown RBP11.39□□□□□ -0.59
VPS16-202ENST00000380445 UBL3O95164 117 aa11.39□□□□□ -0.59
VPS16-202ENST00000380445 IGHMP01871 453 aa11.39□□□□□ -0.59
VPS16-202ENST00000380445 OR8G3PP0DMU2 310 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms