RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 BIDP55957 195 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 KLF3P57682 345 aaPredicted RBP15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 DEFA6Q01524 100 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 PUDPQ08623 228 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 RBBP4Q09028 425 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 PRR31Q5SQ13 230 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 C5orf46Q6UWT4 87 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 USP51Q70EK9 711 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 NET1Q7Z628 596 aaPredicted RBP15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 COMTD1Q86VU5 262 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 ZNF584Q8IVC4 421 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 SKA3Q8IX90 412 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 ADPRHL1Q8NDY3 354 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 SLC30A7Q8NEW0 376 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 BBS10Q8TAM1 723 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 LRR1Q96L50 414 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 MOGAT1Q96PD6 335 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 C7orf69Q9H7B7 122 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 RNF121Q9H920 327 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 DECR2Q9NUI1 292 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 UBAP1Q9NZ09 502 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 WIPI2Q9Y4P8 454 aa15.17■□□□□ 0.02
PDLIM4-202ENST00000379018 IGHV1-69-2A0A0G2JMI3 117 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 CLDN25C9JDP6 229 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 DEAF1O75398 565 aaPredicted RBP15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 SLC22A3O75751 556 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 IGHV2-5P01817 119 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 BGLAPP02818 100 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 IL6P05231 212 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 LCN2P80188 198 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 BST1Q10588 318 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 KRT71Q3SY84 523 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 GLB1L3Q8NCI6 653 aaPredicted RBP15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 SYNPRQ8TBG9 265 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 DNAJA4Q8WW22 397 aaPredicted RBP15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 ITCHQ96J02 903 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 EPYCQ99645 322 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 SH3GL3Q99963 347 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 GAL3ST1Q99999 423 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 ZNF747Q9BV97 191 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 RMND5AQ9H871 391 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 C12orf10Q9HB07 376 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 KCNK9Q9NPC2 374 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 THUMPD1Q9NXG2 353 aaKnown RBP15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 GPR160Q9UJ42 338 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 FBXL3Q9UKT7 428 aa15.16■□□□□ 0.02
PDLIM4-202ENST00000379018 TGP01266 2768 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 LOC102725191A0A1B0GVB3 256 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 J3QLI3 93 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 FZD7O75084 574 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 SERPINA5P05154 406 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 VSNL1P62760 191 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 TEKQ02763 1124 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 PDLIM3Q53GG5 364 aaPredicted RBP15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 SHISA2Q6UWI4 295 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 RBMS3Q6XE24 437 aaKnown RBP15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 ZNF627Q7L945 461 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 KIRREL3Q8IZU9 778 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 SIGLECL1Q8N7X8 197 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 OR9I1Q8NGQ6 314 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 NFKBIDQ8NI38 313 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 TIMD4Q96H15 378 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 CENPHQ9H3R5 247 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 DENND2DQ9H6A0 471 aaPredicted RBP15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 SAP30LQ9HAJ7 183 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 HAO1Q9UJM8 370 aa15.15■□□□□ 0.02
PDLIM4-202ENST00000379018 RGS16O15492 202 aaPredicted RBP15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 ADORA3P0DMS8 318 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 ARAFP10398 606 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 DRD4P21917 467 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 FPR2P25090 351 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 RGS8P57771 180 aaPredicted RBP15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 FOXL1Q12952 345 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 MELKQ14680 651 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 RGNQ15493 299 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 HFEQ30201 348 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 PCGF3Q3KNV8 242 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 PDCD4Q53EL6 469 aaKnown RBP15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 CEP85LQ5SZL2 805 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 ULK3Q6PHR2 472 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 SLC22A24Q8N4F4 322 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 SCAIQ8N9R8 606 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 C11orf40Q8WZ69 217 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 SLC47A1Q96FL8 570 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 SLC41A3Q96GZ6 507 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 RSPO3Q9BXY4 272 aaPredicted RBP15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 ZNF696Q9H7X3 374 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 A4GALTQ9NPC4 353 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 SLCO1C1Q9NYB5 712 aa15.14■□□□□ 0.01
PDLIM4-202ENST00000379018 TPST1O60507 370 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 OR6A2O95222 327 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 ZCCHC18P0CG32 403 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 OR8G3PP0DMU2 310 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 IDO1P14902 403 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 MAKP20794 623 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 PRKAR1BP31321 381 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 CRYBB2P43320 205 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 HNRNPA0Q13151 305 aaKnown RBP15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 OR1Q1Q15612 314 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms