RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 PLA1AQ53H76 456 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 PAPD4Q6PIY7 484 aaKnown RBP11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 TRIB1Q96RU8 372 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 HIPK2Q9H2X6 1198 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 UBQLN4Q9NRR5 601 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 A0A0A6YYJ9 748 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 KLRC4-KLRK1H3BQV0 150 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 ADAM12O43184 909 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 SOWAHCQ53LP3 525 aaPredicted RBP11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 ATPAF1Q5TC12 328 aaPredicted RBP11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 SLC25A46Q96AG3 418 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 VN1R3Q9BXE9 311 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 C17orf113A0A1B0GUU1 675 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 TRIM23P36406 574 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 NLRP8Q86W28 1048 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 SPPL3Q8TCT6 385 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 METTL9Q9H1A3 318 aa11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 FAM212BQ9NTI7 297 aaPredicted RBP11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 ASCC3Q8N3C0 2202 aaKnown RBP11.07□□□□□ -0.64
PCDHA9-201ENST00000378122 TJP1Q07157 1748 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 OR2T1O43869 369 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 OR2T7P0C7T2 308 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 MAKP20794 623 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 NUDT1P36639 197 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 PFN3P60673 137 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 OXA1LQ15070 435 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 CST9LP1Q5W188 147 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 FAM111BQ6SJ93 734 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 OR2T27Q8NH04 317 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 WIF1Q9Y5W5 379 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 ANKRD36CQ5JPF3 1778 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 P2RY10O00398 339 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 CR2P20023 1033 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 TGFBR3Q03167 851 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 UCN3Q969E3 161 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 MARC2Q969Z3 335 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 SLCO4A1Q96BD0 722 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 UQCC2Q9BRT2 126 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 IER2Q9BTL4 223 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 C20orf24Q9BUV8 137 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 TGIF2Q9GZN2 237 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 EVA1AQ9H8M9 152 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 ADAM29Q9UKF5 820 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 PPT2Q9UMR5 302 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 B4GALT3O60512 393 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 GPR75O95800 540 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 CD63P08962 238 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 SERPINF1P36955 418 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 DCDP81605 110 aaKnown RBP11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 REEP5Q00765 189 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 CD276Q5ZPR3 534 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 CMIPQ8IY22 773 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 NANOGP1Q8N7R0 232 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 PRRX2Q99811 253 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 TIMM29Q9BSF4 260 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 SGPP1Q9BX95 441 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 CDCP1Q9H5V8 836 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 ZNF286AQ9HBT8 521 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 FSCN3Q9NQT6 498 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 NDRG3Q9UGV2 375 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 CCL26Q9Y258 94 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 TP53TG5Q9Y2B4 290 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 LOC102725191A0A1B0GVB3 256 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 BHLHE40O14503 412 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 BET1O15155 118 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 TUSC2O75896 110 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 RAB38P57729 211 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 MRPS34P82930 218 aaKnown RBP11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 CTBSQ01459 385 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 GPR176Q14439 515 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 SLCO4C1Q6ZQN7 724 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 GLCCI1Q86VQ1 547 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 GLIPR2Q9H4G4 154 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 WDR76Q9H967 626 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 LTB4R2Q9NPC1 389 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 GNG13Q9P2W3 67 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 A0A1W2PPV4 95 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 H0YGG7 62 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 KCNK2O95069 426 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 C1QBP02746 253 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 TACR3P29371 465 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 RNF4P78317 190 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 L3MBTL4Q8NA19 623 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 SLC7A6Q92536 515 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 RAB3CQ96E17 227 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 OCSTAMPQ9BR26 566 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 LOXL2Q9Y4K0 774 aa11.06□□□□□ -0.64
PCDHA9-201ENST00000378122 TMEM189-UBE2V1I3L0A0 370 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 MSTNO14793 375 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 YKT6O15498 198 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 ATP1B3P54709 279 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 ALKBH1Q13686 389 aaKnown RBP11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 ACTBL2Q562R1 376 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 SLC22A25Q6T423 547 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 SLC30A7Q8NEW0 376 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 DHCR7Q9UBM7 475 aaKnown RBP11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 MRPS28Q9Y2Q9 187 aaKnown RBP11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 MYH9P35579 1960 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms