RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 RBM12BQ8IXT5 1001 aaKnown RBP7.35□□□□□ -1.23
CKAP2-203ENST00000378037 TOMM5Q8N4H5 51 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 OR5L2Q8NGL0 311 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 OR5AK2Q8NH90 309 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 UBALD1Q8TB05 177 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 SLC22A8Q8TCC7 542 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 NT5CQ8TCD5 201 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 SGCZQ96LD1 299 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 UCN2Q96RP3 112 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 UBL7Q96S82 380 aaPredicted RBP7.35□□□□□ -1.23
CKAP2-203ENST00000378037 INTS14Q96SY0 518 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 CKLFQ9UBR5 152 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 ACAD8Q9UKU7 415 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 COPS3Q9UNS2 423 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 ANKHD1Q8IWZ3 2542 aaKnown RBP7.35□□□□□ -1.23
CKAP2-203ENST00000378037 CCDC163A0A0D9SF12 145 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 FAM221AA4D161 298 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 CXCL13O43927 109 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 SLITRK5O94991 958 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 GABARAPO95166 117 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 PNMTP11086 282 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 PGAM2P15259 253 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 PNLIPP16233 465 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 DUSP3P51452 185 aaPredicted RBP7.34□□□□□ -1.23
CKAP2-203ENST00000378037 CCR6P51684 374 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 BAK1Q16611 211 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 ZNF658BQ4V348 819 aaPredicted RBP7.34□□□□□ -1.23
CKAP2-203ENST00000378037 SLC22A10Q63ZE4 541 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 LIN54Q6MZP7 749 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 ZNF517Q6ZMY9 492 aaPredicted RBP7.34□□□□□ -1.23
CKAP2-203ENST00000378037 FAM57BQ71RH2 274 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 CD163Q86VB7 1156 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 UEVLDQ8IX04 471 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 OR4D9Q8NGE8 314 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 OR6Q1Q8NGQ2 317 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 FKBP10Q96AY3 582 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 BCL2L10Q9HD36 194 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 TMEM45AQ9NWC5 275 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 KCND3Q9UK17 655 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 PAIP2BQ9ULR5 123 aaKnown RBP7.34□□□□□ -1.23
CKAP2-203ENST00000378037 ZNF337Q9Y3M9 751 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 TMEM221A6NGB7 291 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 M0R296 226 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 LCATP04180 440 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 CD14P08571 375 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 ZNF20P17024 532 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 S1PR1P21453 382 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 PCMT1P22061 227 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 TGFBR2P37173 567 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 PPICP45877 212 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 RAB40BQ12829 278 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 DOC2BQ14184 412 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 AKIRIN2Q53H80 203 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 BRICD5Q6PL45 260 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 COX15Q7KZN9 410 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 P4HA3Q7Z4N8 544 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 OR13C3Q8NGS6 347 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 LGALS14Q8TCE9 139 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 CCDC120Q96HB5 630 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 GABARAPL3Q9BY60 117 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 PLEKHB1Q9UF11 243 aaPredicted RBP7.34□□□□□ -1.23
CKAP2-203ENST00000378037 IL17BQ9UHF5 180 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 ZNF639Q9UID6 485 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 PCOLCE2Q9UKZ9 415 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 ICAM5Q9UMF0 924 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 FAM230AA0A1W2PPH8 454 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 NKX2-2O95096 273 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 AK1P00568 194 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 GUSBP08236 651 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 CCL3P10147 92 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 CTLA4P16410 223 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 PMP22Q01453 160 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 SRSF6Q13247 344 aaKnown RBP7.34□□□□□ -1.23
CKAP2-203ENST00000378037 TBRG1Q3YBR2 411 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 KLHL26Q53HC5 615 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 LCN1P1Q5VSP4 162 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 UBE2UQ5VVX9 321 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 ZCCHC12Q6PEW1 402 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 TNFAIP8L1Q8WVP5 186 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 SLC25A44Q96H78 314 aaPredicted RBP7.34□□□□□ -1.23
CKAP2-203ENST00000378037 SLC6A7Q99884 636 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 FUZQ9BT04 418 aa7.34□□□□□ -1.23
CKAP2-203ENST00000378037 FUOMA2VDF0 154 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 SYT5O00445 386 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 ADAM10O14672 748 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 RAMP1O60894 148 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 NAT2P11245 290 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 POU4F2Q12837 409 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 EFR3AQ14156 821 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 HNF4GQ14541 408 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 TMEM69Q5SWH9 247 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF704Q6ZNC4 412 aaPredicted RBP7.33□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF554Q86TJ5 538 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 OR6V1Q8N148 313 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 CADM4Q8NFZ8 388 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 OR1N1Q8NGS0 311 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 OR1J4Q8NGS1 313 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 OR5H6Q8NGV6 325 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 OR14A16Q8NHC5 309 aa7.33□□□□□ -1.24
CKAP2-203ENST00000378037 FLVCR1-AS1Q8TAF5 88 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms