RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	TFAP2E	Q6VUC0	442 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	IL22RA1	Q8N6P7	574 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	APH1B	Q8WW43	257 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	GGH	Q92820	318 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	CXorf58	Q96LI9	332 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	TNFRSF13C	Q96RJ3	184 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	KLF2	Q9Y5W3	355 aa	Predicted RBP	10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	OTOGL	Q3ZCN5	2332 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499		A0A0B4J2E0	115 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	SPAAR	A0A1B0GVQ0	90 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499		A0A1B0GX12	115 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	KHDRBS3	O75525	346 aa	Known RBP	10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	SIX6	O95475	246 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	HIST1H2AB	P04908	130 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	TBXA2R	P21731	343 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	TACR3	P29371	465 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	GABARAPL2	P60520	117 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	TIGD6	Q17RP2	521 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	EXOSC6	Q5RKV6	272 aa	Known RBP	10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	HIST3H2A	Q7L7L0	130 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	MARCH9	Q86YJ5	346 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	FAM98A	Q8NCA5	519 aa	Known RBP	10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	APCDD1L	Q8NCL9	501 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	HIST1H2AC	Q93077	130 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	TAAR9	Q96RI9	348 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	PRSS27	Q9BQR3	290 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	FAM212B	Q9NTI7	297 aa	Predicted RBP	10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	BABAM2	Q9NXR7	383 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	TAS2R16	Q9NYV7	291 aa		10.62	□□□□□ -0.71
LMO7-204	ENST00000377499	MYL12B	O14950	172 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	FMO6P	O60774	539 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	TNFSF15	O95150	251 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	MYL12A	P19105	171 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	PGC	P20142	388 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	PNLIPRP2	P54317	469 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	PRAMEF20	Q5VT98	475 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	BICRAL	Q6AI39	1079 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	TMPRSS11A	Q6ZMR5	421 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	SHF	Q7M4L6	423 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	RNF113B	Q8IZP6	322 aa	Known RBP	10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	TCTE3	Q8IZS6	198 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	OR8D4	Q8NGM9	314 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	NSMAF	Q92636	917 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	SDHC	Q99643	169 aa	Predicted RBP	10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	GSX2	Q9BZM3	304 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	ANKRD10	Q9NXR5	420 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	SEC14L4	Q9UDX3	406 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	KCNMB2	Q9Y691	235 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	CDH10	Q9Y6N8	788 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	SDK2	Q58EX2	2172 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	AKAP8	O43823	692 aa	Known RBP	10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	HCN1	O60741	890 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	TFPI	P10646	304 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	PVALB	P20472	110 aa	Predicted RBP	10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	KIR2DL3	P43628	341 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	CXCR4	P61073	352 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	SLC35A2	P78381	396 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	ZNF117	Q03924	483 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	HAGHL	Q6PII5	290 aa	Predicted RBP	10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	B3GLCT	Q6Y288	498 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	RTL4	Q6ZR62	310 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	WDSUB1	Q8N9V3	476 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	LRRC46	Q96FV0	321 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	RPL36	Q9Y3U8	105 aa	Known RBP	10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	MAB21L2	Q9Y586	359 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	VSTM2B	A6NLU5	285 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	RRP8	O43159	456 aa	Known RBP	10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	SLC2A10	O95528	541 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	PPP1R3D	O95685	299 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	PAICS	P22234	425 aa	Known RBP	10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	AHCY	P23526	432 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	PRKCD	Q05655	676 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	OR2B11	Q5JQS5	317 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	ZNF385C	Q66K41	422 aa	Predicted RBP	10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	MRPL14	Q6P1L8	145 aa	Known RBP	10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	LINC00299	Q6ZSB3	139 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	GPALPP1	Q8IXQ4	340 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	KLHL36	Q8N4N3	616 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	MS4A15	Q8N5U1	240 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	LRRC17	Q8N6Y2	441 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	CYB561A3	Q8NBI2	242 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	POC1B	Q8TC44	478 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	GTF3A	Q92664	365 aa	Known RBP	10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	PTDSS2	Q9BVG9	487 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	MED11	Q9P086	117 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499	PPP4R1L	Q9P1A2	415 aa		10.61	□□□□□ -0.71
LMO7-204	ENST00000377499		B4E171	279 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	NPIPB9	F8W1W9	429 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499		G3V3Y1	287 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	SNX4	O95219	450 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	PCMT1	P22061	227 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	OC90	Q02509	493 aa	Predicted RBP	10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	MVK	Q03426	396 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	TOMM34	Q15785	309 aa	Predicted RBP	10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	SLC25A25	Q6KCM7	469 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	PLBD1	Q6P4A8	553 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	ZNF620	Q6ZNG0	422 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	POGLUT1	Q8NBL1	392 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	OR2Y1	Q8NGV0	311 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	CFAP54	Q96N23	3096 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms