RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 FBXW11Q9UKB1 542 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 FZD10Q9ULW2 581 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 IFT140Q96RY7 1462 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 NUP160Q12769 1436 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 LYPLA1O75608 230 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 PTGFRP43088 359 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 LSM11P83369 360 aaKnown RBP eCLIP5.55□□□□□ -1.52
SCN2A-202ENST00000375427 SPHARQ15513 63 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 COX19Q49B96 90 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 TOR2AQ5JU69 321 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 C4orf32Q8N8J7 132 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 GPR32P1Q8NGA4 272 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 PXYLP1Q8TE99 480 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 SDR42E1Q8WUS8 393 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 DDOQ99489 341 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 PKMYT1Q99640 499 aa5.55□□□□□ -1.52
SCN2A-202ENST00000375427 PLSCR5A0PG75 271 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 ZBTB7BO15156 539 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 TUSC2O75896 110 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 OR4F21O95013 312 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 MVDP53602 400 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GSCP56915 257 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SERF2P84101 59 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 PRAMEF5Q5TYX0 476 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 DPPA3Q6W0C5 159 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 VKORC1L1Q8N0U8 176 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 RHOXF1Q8NHV9 184 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 CDS1Q92903 461 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SEMA3CQ99985 751 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 IL21Q9HBE4 155 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GPRC5CQ9NQ84 441 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 YAE1D1Q9NRH1 226 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 RNF146Q9NTX7 359 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 TRAV8-2A0A0B4J237 113 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 OR2A25A4D2G3 310 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SCAMP3O14828 347 aaKnown RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GNSP15586 552 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 LTB4RQ15722 352 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 ZNF506Q5JVG8 444 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 PLEKHS1Q5SXH7 462 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 TFAP2EQ6VUC0 442 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 ADGRE4PQ86SQ3 457 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 UBA3Q8TBC4 463 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 ZNF418Q8TF45 676 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 ZMYND19Q96E35 227 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 TIMD4Q96H15 378 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 DPH2Q9BQC3 489 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 TMPRSS4Q9NRS4 437 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 THSD1Q9NS62 852 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 FBXL17Q9UF56 701 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 HPSEQ9Y251 543 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 MYMKA6NI61 221 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 TMEM200CA6NKL6 621 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 APOC4-APOC2K7ER74 178 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 ERBB2P04626 1255 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 PIPP12273 146 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 CDKN2DP55273 166 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 OC90Q02509 493 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GAGE2BQ13066 116 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 FAM214AQ32MH5 1076 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GAGE2EQ4V326 116 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SLC27A1Q6PCB7 646 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 PLXDC2Q6UX71 529 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 OR51G2Q8NGK0 314 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GNPDA2Q8TDQ7 276 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 LCORQ96JN0 433 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 TBX15Q96SF7 602 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GAGE2DQ9UEU5 116 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 M0R135 149 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 CYR61O00622 381 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 CTDSP2O14595 271 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 HYAL3O43820 417 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SOCS5O75159 536 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 DPM2O94777 84 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 C8GP07360 202 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 DBHP09172 617 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 HOXD3P31249 432 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 C1QTNF8P60827 252 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 UBE2NP61088 152 aaKnown RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 CNN3Q15417 329 aaKnown RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 ACSF3Q4G176 576 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 TMEM128Q5BJH2 165 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 PABPC1L2AQ5JQF8 200 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 NRMQ8IXM6 262 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 ASB5Q8WWX0 329 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 RGP1Q92546 391 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 ZNF799Q96GE5 643 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 POLDIP3Q9BY77 421 aaKnown RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 HEYLQ9NQ87 328 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 MUTYHQ9UIF7 546 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 DSCAML1Q8TD84 2053 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 NBASA2RRP1 2371 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 CLDN34H7C241 214 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 RBFOX2O43251 390 aaKnown RBP eCLIP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 DDNO94850 711 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 C8orf89P0DMQ9 161 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 KLRC1P26715 233 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 PRICKLE4Q2TBC4 344 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 PLPPR5Q32ZL2 321 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms