RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 CDK6Q00534 326 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 LRIF1Q5T3J3 769 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 GCNT6Q5T4J0 391 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 FAHD2BQ6P2I3 314 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-202ENST00000374426 SHQ1Q6PI26 577 aaKnown RBP11.8□□□□□ -0.52
CXCL12-202ENST00000374426 THSD4Q6ZMP0 1018 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 WDR88Q6ZMY6 472 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 PIWIL3Q7Z3Z3 882 aaKnown RBP11.8□□□□□ -0.52
CXCL12-202ENST00000374426 KRT73Q86Y46 540 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 SKA3Q8IX90 412 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 GOLGA6L1Q8N7Z2 621 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 ZNF418Q8TF45 676 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-202ENST00000374426 FAHD2AQ96GK7 314 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 TMEM43Q9BTV4 400 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 SPATA5L1Q9BVQ7 753 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 ZNF416Q9BWM5 594 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 PARD6BQ9BYG5 372 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 ZNF385DQ9H6B1 395 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 TMEM27Q9HBJ8 222 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 SELENONQ9NZV5 590 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 SLC7A8Q9UHI5 535 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 FBXL3Q9UKT7 428 aa11.8□□□□□ -0.52
CXCL12-202ENST00000374426 TRAV20A0A0B4J274 112 aa11.79□□□□□ -0.52
CXCL12-202ENST00000374426 CLPTM1O96005 669 aa11.79□□□□□ -0.52
CXCL12-202ENST00000374426 AVPP01185 164 aa11.79□□□□□ -0.52
CXCL12-202ENST00000374426 MAGEB1P43366 347 aa11.79□□□□□ -0.52
CXCL12-202ENST00000374426 BIDP55957 195 aa11.79□□□□□ -0.52
CXCL12-202ENST00000374426 HILS1P60008 231 aa11.79□□□□□ -0.52
CXCL12-202ENST00000374426 ACTG1P63261 375 aa11.79□□□□□ -0.52
CXCL12-202ENST00000374426 SCGB2A2Q13296 93 aa11.79□□□□□ -0.52
CXCL12-202ENST00000374426 ALKBH6Q3KRA9 238 aa11.79□□□□□ -0.52
CXCL12-202ENST00000374426 FUNDC1Q8IVP5 155 aa11.79□□□□□ -0.52
CXCL12-202ENST00000374426 PAQR4Q8N4S7 273 aaPredicted RBP11.79□□□□□ -0.52
CXCL12-202ENST00000374426 C10orf53Q8N6V4 93 aa11.79□□□□□ -0.52
CXCL12-202ENST00000374426 IKZF5Q9H5V7 419 aa11.79□□□□□ -0.52
CXCL12-202ENST00000374426 G6PC2Q9NQR9 355 aa11.79□□□□□ -0.52
CXCL12-202ENST00000374426 VAPAQ9P0L0 249 aa11.79□□□□□ -0.52
CXCL12-202ENST00000374426 ZNF346Q9UL40 294 aaKnown RBP11.79□□□□□ -0.52
CXCL12-202ENST00000374426 LOC105371242A0A075B767 164 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 TMEM89A2RUT3 159 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 PRORSD1PA6NEY8 169 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 C11orf98E9PRG8 122 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 PNPP00491 289 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 FAM157BP0CG42 384 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 ADORA3P0DMS8 318 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 EGR1P18146 543 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 EPHA1P21709 976 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 AQP1P29972 269 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 LSP1P33241 339 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 MRPL19P49406 292 aaKnown RBP11.78□□□□□ -0.52
CXCL12-202ENST00000374426 CCL8P80075 99 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 MYBPC1Q00872 1141 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 SCARB2Q14108 478 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 NKPD1Q17RQ9 610 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 PAGE3Q5JUK9 113 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 SWT1Q5T5J6 900 aaKnown RBP11.78□□□□□ -0.52
CXCL12-202ENST00000374426 RGS7BPQ6MZT1 257 aaPredicted RBP11.78□□□□□ -0.52
CXCL12-202ENST00000374426 USP43Q70EL4 1123 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 PEG10Q86TG7 708 aaKnown RBP11.78□□□□□ -0.52
CXCL12-202ENST00000374426 SLC22A24Q8N4F4 322 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 OR5J2Q8NH18 312 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 OR6X1Q8NH79 312 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 FAM216AQ8WUB2 273 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 TMEM54Q969K7 222 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 TSPAN32Q96QS1 320 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 TMEM38AQ9H6F2 299 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 SLC52A3Q9NQ40 469 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 GLTPQ9NZD2 209 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 TAAR3PQ9P1P4 343 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 PCDHB10Q9UN67 800 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 GMEB1Q9Y692 573 aa11.78□□□□□ -0.52
CXCL12-202ENST00000374426 IGLV3-9A0A075B6K5 115 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 TRBV5-3A0A0A0MS03 114 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 C17orf100A8MU93 164 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 ZNF500O60304 480 aaPredicted RBP11.77□□□□□ -0.53
CXCL12-202ENST00000374426 CDC14BO60729 498 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 MT-ATP6P00846 226 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 OR8G3PP0DMU2 310 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 CCL2P13500 99 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 ZNF250P15622 560 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 ARFIP2P53365 341 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 SLC18A1P54219 525 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 ERVS71-1P61550 626 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 AVPI1Q5T686 147 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 LRFN4Q6PJG9 635 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 BLOC1S3Q6QNY0 202 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 EPGNQ6UW88 154 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 LINC00114Q6XXX2 140 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 SLC35D2Q76EJ3 337 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 CROCCP2Q86T23 111 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 RANBP3LQ86VV4 465 aaPredicted RBP11.77□□□□□ -0.53
CXCL12-202ENST00000374426 ARMC8Q8IUR7 673 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 C3orf56Q8N813 242 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 SLC30A7Q8NEW0 376 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 GCDHQ92947 438 aaPredicted RBP11.77□□□□□ -0.53
CXCL12-202ENST00000374426 ZNF607Q96SK3 696 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 SH3GL3Q99963 347 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 ZNF665Q9H7R5 613 aa11.77□□□□□ -0.53
CXCL12-202ENST00000374426 HINT3Q9NQE9 182 aaKnown RBP11.77□□□□□ -0.53
CXCL12-202ENST00000374426 TMEM38BQ9NVV0 291 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms