RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 RRADP55042 308 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 P2RX3P56373 397 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 GNB1P62873 340 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 OR8U1Q8NH10 309 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 SLC41A2Q96JW4 573 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 NRSN2Q9GZP1 204 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 PLK3Q9H4B4 646 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 NOX4Q9NPH5 578 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 MUTYHQ9UIF7 546 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 SERTM2A0A1B0GWG4 89 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 M0QYG6 137 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 CTDSP2O14595 271 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 NFYBP25208 207 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 RBMS2Q15434 407 aaKnown RBP13.23□□□□□ -0.29
TRAF1-201ENST00000373887 FCRL1Q96LA6 429 aa13.23□□□□□ -0.29
TRAF1-201ENST00000373887 WDR83Q9BRX9 315 aaKnown RBP13.23□□□□□ -0.29
TRAF1-201ENST00000373887 ELLP55199 621 aaPredicted RBP13.22□□□□□ -0.29
TRAF1-201ENST00000373887 LGALS14Q8TCE9 139 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 HAVCR2Q8TDQ0 301 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 KATNB1Q9BVA0 655 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 MRPS28Q9Y2Q9 187 aaKnown RBP13.22□□□□□ -0.29
TRAF1-201ENST00000373887 TRBV4-1A0A0J9YWV2 114 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 POM121BA6NF01 834 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 PRAMEF4O60810 478 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 GPX3P22352 226 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 AADACP22760 399 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 FLI1Q01543 452 aaPredicted RBP13.22□□□□□ -0.29
TRAF1-201ENST00000373887 TNFRSF17Q02223 184 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 ACSM1Q08AH1 577 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 SLC14A2Q15849 920 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 ADAMTSL4Q6UY14 1074 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 DBX2Q6ZNG2 339 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 SERPINA11Q86U17 422 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 GCNT2Q8N0V5 402 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 FER1L6-AS2Q96M78 137 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 EFSO43281 561 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 BLVRBP30043 206 aaPredicted RBP13.22□□□□□ -0.29
TRAF1-201ENST00000373887 GABRA5P31644 462 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 HBG1P69891 147 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 HBG2P69892 147 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 DBPQ10586 325 aaPredicted RBP13.22□□□□□ -0.29
TRAF1-201ENST00000373887 EDDM3AQ14507 147 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 OR10K2Q6IF99 312 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 LAX1Q8IWV1 398 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 OR14A16Q8NHC5 309 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 SLC37A2Q8TED4 501 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 NTMT1Q9BV86 223 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 SEMA6CQ9H3T2 930 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 UBQLN4Q9NRR5 601 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 PHLDA2Q53GA4 152 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 AVPI1Q5T686 147 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 SYT9Q86SS6 491 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 CHCHD4Q8N4Q1 142 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 ASB17Q8WXJ9 295 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 ARNT2Q9HBZ2 717 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 FGF22Q9HCT0 170 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 MMP17Q9ULZ9 603 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 NOSIPQ9Y314 301 aaKnown RBP13.22□□□□□ -0.29
TRAF1-201ENST00000373887 NRAPQ86VF7 1730 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 KRBOX1C9JBD0 128 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 THBS1P07996 1170 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 ICAM2P13598 275 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 SLC1A3P43003 542 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 MRPL2Q5T653 305 aaKnown RBP13.22□□□□□ -0.29
TRAF1-201ENST00000373887 LINC00346Q8IVM7 164 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 ZADH2Q8N4Q0 377 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 OR1S2Q8NGQ3 325 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 SDR39U1Q9NRG7 319 aaPredicted RBP13.22□□□□□ -0.29
TRAF1-201ENST00000373887 V9GYS6 101 aa13.22□□□□□ -0.29
TRAF1-201ENST00000373887 TMEM72A0PK05 275 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 P2RY10O00398 339 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 ANGPTL7O43827 346 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF728P0DKX0 622 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 GABRB3P28472 473 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 GDNFP39905 211 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 MLLT11Q13015 90 aaPredicted RBP13.21□□□□□ -0.29
TRAF1-201ENST00000373887 OR8G2PQ6IF36 304 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF454Q8N9F8 522 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 SMAP2Q8WU79 429 aaPredicted RBP13.21□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF566Q969W8 418 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 QPCTLQ9NXS2 382 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 CCR2P41597 374 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 RAP2BP61225 183 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 VEZF1Q14119 521 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 CLEC14AQ86T13 490 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 ADGRG5Q8IZF4 528 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 CCL4L1Q8NHW4 92 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 WBP1LQ9NX94 342 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 TIAM2Q8IVF5 1701 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 DDAH2O95865 285 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 CDK4P11802 303 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 GPR85P60893 370 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 HBA1P69905 142 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 GPR176Q14439 515 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 Q6ZS52 159 aa13.21□□□□□ -0.29
TRAF1-201ENST00000373887 CDHR4A6H8M9 788 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 MRPS14O60783 128 aaKnown RBP13.21□□□□□ -0.3
TRAF1-201ENST00000373887 RAB40ALP0C0E4 278 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 HTR2CP28335 458 aa13.21□□□□□ -0.3
TRAF1-201ENST00000373887 OLIG3Q7RTU3 272 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms