RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CATR1Q13166 79 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 ERVMER34-1Q9H9K5 563 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 LIN7BQ9HAP6 207 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF629Q9UEG4 869 aaPredicted RBP13.12□□□□□ -0.31
LMX1B-202ENST00000373474 FAM96BQ9Y3D0 163 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 PPP5D1E7EU14 171 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF44P15621 663 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 SNCAP37840 140 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 YPEL5P62699 121 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 ZP2Q05996 745 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 ADIRFQ15847 76 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 TMEFF1Q8IYR6 380 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 GCNT2Q8N0V5 402 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 C20orf85Q9H1P6 137 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 CD207Q9UJ71 328 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 TMEM72A0PK05 275 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 BTBD17A6NE02 478 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 ANKRD30BLA7E2S9 258 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 OR2C1O95371 312 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 CD53P19397 219 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 MMP11P24347 488 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 HTR2CP28335 458 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 BDH1Q02338 343 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 SLC22A6Q4U2R8 563 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 SLC35D3Q5M8T2 416 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 C5orf46Q6UWT4 87 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 PLPP6Q8IY26 295 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 OR5M8Q8NGP6 311 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 ACER3Q9NUN7 267 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 STEAP1Q9UHE8 339 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 GFRA2O00451 464 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 CPT2P23786 658 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 RPL13AP40429 203 aaKnown RBP13.12□□□□□ -0.31
LMX1B-202ENST00000373474 NPBWR1P48145 328 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 POU3F1Q03052 451 aaPredicted RBP13.12□□□□□ -0.31
LMX1B-202ENST00000373474 MDGA2Q7Z553 956 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 SLC7A6Q92536 515 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 TOX2Q96NM4 488 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 C12orf57Q99622 126 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 ZBP1Q9H171 429 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 NOX4Q9NPH5 578 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 FBXO8Q9NRD0 319 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 SLC25A37Q9NYZ2 338 aa13.12□□□□□ -0.31
LMX1B-202ENST00000373474 TACR3P29371 465 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 ATP1B3P54709 279 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 CLDN12P56749 244 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 SEC61A1P61619 476 aaKnown RBP13.11□□□□□ -0.31
LMX1B-202ENST00000373474 MAT1AQ00266 395 aaKnown RBP13.11□□□□□ -0.31
LMX1B-202ENST00000373474 SF3B4Q15427 424 aaKnown RBP eCLIP13.11□□□□□ -0.31
LMX1B-202ENST00000373474 VAMP3Q15836 100 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 FJX1Q86VR8 437 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 ECM29Q5VYK3 1845 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 GFYI3L273 518 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 PLPP1O14494 284 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 NUDT21O43809 227 aaKnown RBP13.11□□□□□ -0.31
LMX1B-202ENST00000373474 CALCRP30988 508 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 ALKBH1Q13686 389 aaKnown RBP13.11□□□□□ -0.31
LMX1B-202ENST00000373474 LRRC26Q2I0M4 334 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF750Q32MQ0 723 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 CADM3Q8N126 398 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 LILRA3Q8N6C8 439 aaPredicted RBP13.11□□□□□ -0.31
LMX1B-202ENST00000373474 PHYHIPQ92561 330 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 SFXN2Q96NB2 322 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 NMNAT3Q96T66 252 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 CHST8Q9H2A9 424 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 LMAN1LQ9HAT1 526 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 GIPP09681 153 aaPredicted RBP13.11□□□□□ -0.31
LMX1B-202ENST00000373474 SBK3P0C264 359 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 CPEP16870 476 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 PLCXD3Q63HM9 321 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 MFSD12Q6NUT3 480 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 ADAM5Q6NVV9 412 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 ABHD17CQ6PCB6 329 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 SHISA6Q6ZSJ9 500 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 FAM185AQ8N0U4 392 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 OR1M1Q8NGA1 313 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 A0A087WUU8 490 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 A0A1B0GWA3 101 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 TMEM129A0AVI4 362 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 SLC5A10A0PJK1 596 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 PAPLNO95428 1278 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 CRMP1Q14194 572 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 OXA1LQ15070 435 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 TAF9Q16594 264 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 OGFOD3Q6PK18 319 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 RAB3CQ96E17 227 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 HHIPQ96QV1 700 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 GAREM1Q9H706 876 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 OSGIN2Q9Y236 505 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 TNRC6CQ9HCJ0 1690 aaKnown RBP13.11□□□□□ -0.31
LMX1B-202ENST00000373474 H7C1C5 153 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 TAAR5O14804 337 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 LCN6P62502 163 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 EEF1A1P68104 462 aaKnown RBP13.11□□□□□ -0.31
LMX1B-202ENST00000373474 ANKLE1Q8NAG6 615 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 OR1S2Q8NGQ3 325 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 FAM174AQ8TBP5 190 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 SLC25A21Q9BQT8 299 aaPredicted RBP13.11□□□□□ -0.31
LMX1B-202ENST00000373474 ZCCHC4Q9H5U6 513 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 MOB1AQ9H8S9 216 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms