RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ZNF879B4DU55 563 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 ORC5O43913 435 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 AHSA1O95433 338 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 ANXA2P07355 339 aaKnown RBP10.63□□□□□ -0.71
PDE6C-201ENST00000371447 ARSBP15848 533 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 CTLA4P16410 223 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 NUDT1P36639 197 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 MRPL28Q13084 256 aaKnown RBP10.63□□□□□ -0.71
PDE6C-201ENST00000371447 GFOD2Q3B7J2 385 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 LYSMD4Q5XG99 296 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 OGFOD3Q6PK18 319 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 ZNF440Q8IYI8 595 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 D2HGDHQ8N465 521 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 HOXB13Q92826 284 aaPredicted RBP10.63□□□□□ -0.71
PDE6C-201ENST00000371447 INTS14Q96SY0 518 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 PELOQ9BRX2 385 aaKnown RBP10.63□□□□□ -0.71
PDE6C-201ENST00000371447 CRB3Q9BUF7 120 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 CACNG6Q9BXT2 260 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 CHIAQ9BZP6 476 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 CDCP1Q9H5V8 836 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 RCE1Q9Y256 329 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 HIF3AQ9Y2N7 669 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 COA3Q9Y2R0 106 aaPredicted RBP10.63□□□□□ -0.71
PDE6C-201ENST00000371447 ZNF281Q9Y2X9 895 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 NOX1Q9Y5S8 564 aa10.63□□□□□ -0.71
PDE6C-201ENST00000371447 A0A1W2PQM1 296 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 HMX3A6NHT5 357 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 KHDRBS3O75525 346 aaKnown RBP10.62□□□□□ -0.71
PDE6C-201ENST00000371447 F10P00742 488 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 SERPINA3P01011 423 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 ANKRD34CP0C6C1 535 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 ASAH2BP0C7U1 165 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 GIMD1P0DJR0 217 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 BDH1Q02338 343 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 POU3F1Q03052 451 aaPredicted RBP10.62□□□□□ -0.71
PDE6C-201ENST00000371447 CDONQ4KMG0 1287 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 C1orf140Q5VVS0 124 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 PLPP7Q8NBV4 271 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 PMM1Q92871 262 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 ZNF285Q96NJ3 590 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 OCIAD1Q9NX40 245 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 MMACHCQ9Y4U1 282 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 FKBP7Q9Y680 259 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 LRP4O75096 1905 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 PHF3Q92576 2039 aaKnown RBP10.62□□□□□ -0.71
PDE6C-201ENST00000371447 IGKV3D-11A0A0A0MRZ8 115 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 A0A1W2PNR3 127 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 ARPC3O15145 178 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 OR2J2O76002 312 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 NPR2P20594 1047 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 EMP2P54851 167 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 TOMM20Q15388 145 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 SF3A2Q15428 464 aaKnown RBP10.62□□□□□ -0.71
PDE6C-201ENST00000371447 MAMDC2Q7Z304 686 aaPredicted RBP10.62□□□□□ -0.71
PDE6C-201ENST00000371447 FAM122BQ7Z309 247 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 KRT77Q7Z794 578 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 ADGRG3Q86Y34 549 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 PCNPQ8WW12 178 aaKnown RBP10.62□□□□□ -0.71
PDE6C-201ENST00000371447 ACOT12Q8WYK0 555 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 ZNF578Q96N58 590 aaPredicted RBP10.62□□□□□ -0.71
PDE6C-201ENST00000371447 OR1F2PQ96R84 312 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 CDX2Q99626 313 aaPredicted RBP10.62□□□□□ -0.71
PDE6C-201ENST00000371447 GAREM1Q9H706 876 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 SEC61A2Q9H9S3 476 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 HAO2Q9NYQ3 351 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 HSPB11Q9Y547 144 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 HRH3Q9Y5N1 445 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 CACNG2Q9Y698 323 aa10.62□□□□□ -0.71
PDE6C-201ENST00000371447 SLC43A1O75387 559 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 IFNGR1P15260 489 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 PRKACBP22694 351 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 CLDN6P56747 220 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 SNTB2Q13425 540 aaKnown RBP10.61□□□□□ -0.71
PDE6C-201ENST00000371447 FCN2Q15485 313 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 HLA-BQ31612 363 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 FNDC7Q5VTL7 733 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 OR8S1Q8NH09 359 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 SYNPRQ8TBG9 265 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 OR10A4Q9H209 315 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 METTL7AQ9H8H3 244 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 CNOT1A5YKK6 2376 aaKnown RBP10.61□□□□□ -0.71
PDE6C-201ENST00000371447 ASPMQ8IZT6 3477 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 DCDC2BA2VCK2 349 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 FITM1A5D6W6 292 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 TRABD2BA6NFA1 517 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 RPS4XP62701 263 aaKnown RBP10.61□□□□□ -0.71
PDE6C-201ENST00000371447 GPLD1P80108 840 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 CBFBQ13951 182 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 PXKQ7Z7A4 578 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 SLC39A7Q92504 469 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 NXPE2Q96DL1 559 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 LAT2Q9GZY6 243 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 FBXL3Q9UKT7 428 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 A0A0A6YYJ9 748 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 SSNA1O43805 119 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 TACSTD2P09758 323 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 SLC16A9Q7RTY1 509 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 GLB1L2Q8IW92 636 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 SCAIQ8N9R8 606 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 FAM181AQ8N9Y4 354 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms