RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 BMP7P18075 431 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 PAX6P26367 422 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 CD1CP29017 333 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 ELAVL1Q15717 326 aaKnown RBP10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 ZCCHC12Q6PEW1 402 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 LINC00114Q6XXX2 140 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 FAM219AQ8IW50 185 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 PRSS35Q8N3Z0 413 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 SLC30A7Q8NEW0 376 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 OR51D1Q8NGF3 324 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 ASB13Q8WXK3 278 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 SEH1LQ96EE3 360 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 AIF1LQ9BQI0 150 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 ZNF350Q9GZX5 532 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 YBX2Q9Y2T7 364 aaKnown RBP10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 A0A1W2PPC1 479 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 FBP1P09467 338 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 APEHP13798 732 aaKnown RBP10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 GTF2F2P13984 249 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 DLSTP36957 453 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 CXADRP78310 365 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 ALG11Q2TAA5 492 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 GABRG1Q8N1C3 465 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 ROBO4Q8WZ75 1007 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 TFGQ92734 400 aaPredicted RBP10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 NECAB3Q96P71 396 aaPredicted RBP10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 LGR4Q9BXB1 951 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 EXO5Q9H790 373 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 TMEM27Q9HBJ8 222 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 OR14I1A6ND48 311 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 RIIAD1A6NNX1 92 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 PRICKLE3O43900 615 aaPredicted RBP10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 PMS2P2O95744 297 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 MAS1P04201 325 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 CD14P08571 375 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 CSF1P09603 554 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 ELFN1P0C7U0 828 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 NTSP30990 170 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 SOX2P48431 317 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 FHL5Q5TD97 284 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 STEAP1BQ6NZ63 245 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 C11orf88Q6PI97 169 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 FAM122BQ7Z309 247 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 NAA40Q86UY6 237 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 CCDC74AQ96AQ1 378 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 PTCHD1Q96NR3 888 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 SCRT1Q9BWW7 348 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 ULBP3Q9BZM4 244 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 MTHFD2LQ9H903 347 aaPredicted RBP10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 ETV7Q9Y603 341 aa10.6□□□□□ -0.71
SMARCA1-201ENST00000371121 A0A0B4J2E0 115 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 C17orf113A0A1B0GUU1 675 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 A0A1B0GX12 115 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 KANTRA0A1W2PQU2 76 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 DCTN6O00399 190 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 HLA-GP17693 338 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 ZBTB25P24278 435 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 PEBP1P30086 187 aaKnown RBP10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 DIO1P49895 249 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 FABP9Q0Z7S8 132 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 MOGAT2Q3SYC2 334 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 TRMT12Q53H54 448 aaKnown RBP10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 EXD3Q8N9H8 876 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 ZSCAN4Q8NAM6 433 aaPredicted RBP10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 OR4C6Q8NH72 309 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 CXorf40AQ8TE69 158 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 SNX33Q8WV41 574 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 MCHR2Q969V1 340 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 RAD51AP1Q96B01 352 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 MARS2Q96GW9 593 aaKnown RBP10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 TSSK2Q96PF2 358 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 RSRP1Q9BUV0 290 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 MYOZ1Q9NP98 299 aaPredicted RBP10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 WDR45Q9Y484 360 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 TBC1D3KA0A087X1G2 549 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 TTLL8A6PVC2 850 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 LEFTY2O00292 366 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 RDH16O75452 317 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 CLEC3AO75596 197 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 RCBTB2O95199 551 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 AKAIN1P0CW23 69 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 PGAM2P15259 253 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 DDX6P26196 483 aaKnown RBP eCLIP10.59□□□□□ -0.714e-6■■□□□ 13.3
SMARCA1-201ENST00000371121 ID4P47928 161 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 TAF13Q15543 124 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 SGCAQ16586 387 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 SLC22A6Q4U2R8 563 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 C17orf99Q6UX52 265 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 UNQ6494/PRO21346Q6UXR6 183 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 TMPRSS12Q86WS5 348 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 SKA3Q8IX90 412 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 PHYHIPQ92561 330 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 CPNE2Q96FN4 548 aaPredicted RBP10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 SLC6A7Q99884 636 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 RHBDD3Q9Y3P4 386 aa10.59□□□□□ -0.71
SMARCA1-201ENST00000371121 DBX1A6NMT0 343 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms