RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 SNTB1Q13884 538 aaKnown RBP12.12□□□□□ -0.47
SSR4-202ENST00000370085 C9orf135Q5VTT2 229 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 DPY19L2P2Q6ZN68 376 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 CCDC36Q8IYA8 594 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 OR9Q2Q8NGE9 314 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 ASB10Q8WXI3 467 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 DNAJC9Q8WXX5 260 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 NRBF2Q96F24 287 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 C14orf79Q96F83 325 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 ZC3HAV1LQ96H79 300 aaKnown RBP12.12□□□□□ -0.47
SSR4-202ENST00000370085 ZNF570Q96NI8 536 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 WFIKKN1Q96NZ8 548 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 RBP7Q96R05 134 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 GPX7Q96SL4 187 aaPredicted RBP12.12□□□□□ -0.47
SSR4-202ENST00000370085 KATNB1Q9BVA0 655 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 DGCR6LQ9BY27 220 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 GPR35Q9HC97 309 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 OBP2BQ9NPH6 170 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 GLTPQ9NZD2 209 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 PDP1Q9P0J1 537 aaPredicted RBP12.12□□□□□ -0.47
SSR4-202ENST00000370085 KIF17Q9P2E2 1029 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 AMDHD2Q9Y303 409 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 UNC79Q9P2D8 2635 aa12.12□□□□□ -0.47
SSR4-202ENST00000370085 ZNF99A8MXY4 864 aaPredicted RBP12.11□□□□□ -0.47
SSR4-202ENST00000370085 PDLIM1O00151 329 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 PTP4A3O75365 173 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 ITGA5P08648 1049 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 PGA4P0DJD7 388 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 PGA3P0DJD8 388 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 APEHP13798 732 aaKnown RBP12.11□□□□□ -0.47
SSR4-202ENST00000370085 ANXA8P13928 327 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 SDHAP31040 664 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 ACVR1BP36896 505 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 NR1H2P55055 460 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 CD47Q08722 323 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 PPP1R8Q12972 351 aaKnown RBP12.11□□□□□ -0.47
SSR4-202ENST00000370085 KPNB1Q14974 876 aaKnown RBP12.11□□□□□ -0.47
SSR4-202ENST00000370085 DAZAP2Q15038 168 aaPredicted RBP12.11□□□□□ -0.47
SSR4-202ENST00000370085 PPA1Q15181 289 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 ATP6AP1Q15904 470 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 GABRA6Q16445 453 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 CEACAM16Q2WEN9 425 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 RFX4Q33E94 735 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 ZNF787Q6DD87 383 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 ANKRD16Q6P6B7 361 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 KLHL17Q6TDP4 642 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 NHLRC1Q6VVB1 395 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 RASSF6Q6ZTQ3 369 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 ADCK1Q86TW2 530 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 IGFN1Q86VF2 1251 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 HIPK1Q86Z02 1210 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 ARIH2OSQ8N7S6 290 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 NOXO1Q8NFA2 376 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 STMN2Q93045 179 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 TMEM54Q969K7 222 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 SLCO4A1Q96BD0 722 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 MUS81Q96NY9 551 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 ALG12Q9BV10 488 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 OR52D1Q9H346 318 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 SMURF2Q9HAU4 748 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 ZNF346Q9UL40 294 aaKnown RBP12.11□□□□□ -0.47
SSR4-202ENST00000370085 CDH10Q9Y6N8 788 aa12.11□□□□□ -0.47
SSR4-202ENST00000370085 CELSR2Q9HCU4 2923 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 A6NNC1 897 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 IMPA2O14732 288 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 IDH3BO43837 385 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 MGRN1O60291 552 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 TRMUO75648 421 aaKnown RBP12.1□□□□□ -0.47
SSR4-202ENST00000370085 FARS2O95363 451 aaKnown RBP12.1□□□□□ -0.47
SSR4-202ENST00000370085 GASTP01350 101 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 CRYGSP22914 178 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 ERVK-25P63136 954 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 TSC22D1Q15714 1073 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 BEX5Q5H9J7 111 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 THEM4Q5T1C6 240 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 ARMC4Q5T2S8 1044 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 ZNF770Q6IQ21 691 aaPredicted RBP12.1□□□□□ -0.47
SSR4-202ENST00000370085 ALKBH2Q6NS38 261 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 SHQ1Q6PI26 577 aaKnown RBP12.1□□□□□ -0.47
SSR4-202ENST00000370085 ZNF620Q6ZNG0 422 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 WFDC8Q8IUA0 241 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 ZDHHC13Q8IUH4 622 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 SVOPLQ8N434 492 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 CLDN22Q8N7P3 220 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 ATG16L2Q8NAA4 619 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 LRRC75AQ8NAA5 344 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 SYT14Q8NB59 555 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 OR1K1Q8NGR3 316 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 OR5K1Q8NHB7 308 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 MAGEE2Q8TD90 523 aaPredicted RBP12.1□□□□□ -0.47
SSR4-202ENST00000370085 NANOS1Q8WY41 292 aaKnown RBP12.1□□□□□ -0.47
SSR4-202ENST00000370085 GTPBP3Q969Y2 492 aaKnown RBP12.1□□□□□ -0.47
SSR4-202ENST00000370085 BOD1Q96IK1 185 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 FEVQ99581 238 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 IFT27Q9BW83 186 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 TEX12Q9BXU0 123 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 ESRP2Q9H6T0 727 aaKnown RBP12.1□□□□□ -0.47
SSR4-202ENST00000370085 NRIP3Q9NQ35 241 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 VNN3Q9NY84 501 aa12.1□□□□□ -0.47
SSR4-202ENST00000370085 G3V2T6 193 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms