RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TMEM27Q9HBJ8 222 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 MEPEQ9NQ76 525 aaPredicted RBP9.68□□□□□ -0.86
TPM3-212ENST00000368533 BABAM2Q9NXR7 383 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 ZNF223Q9UK11 482 aaPredicted RBP9.68□□□□□ -0.86
TPM3-212ENST00000368533 PRELID3BQ9Y3B1 194 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 MMACHCQ9Y4U1 282 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 FAM186AA6NE01 2351 aa9.68□□□□□ -0.86
TPM3-212ENST00000368533 SERINC4A6NH21 518 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 RIIAD1A6NNX1 92 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 TRIM3O75382 744 aaPredicted RBP9.67□□□□□ -0.86
TPM3-212ENST00000368533 RPS4Y1P22090 263 aaKnown RBP9.67□□□□□ -0.86
TPM3-212ENST00000368533 ABCD3P28288 659 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 SHC1P29353 583 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 ACAA2P42765 397 aaKnown RBP9.67□□□□□ -0.86
TPM3-212ENST00000368533 GDI2P50395 445 aaKnown RBP9.67□□□□□ -0.86
TPM3-212ENST00000368533 DUSP3P51452 185 aaPredicted RBP9.67□□□□□ -0.86
TPM3-212ENST00000368533 INPP5JQ15735 1006 aaPredicted RBP9.67□□□□□ -0.86
TPM3-212ENST00000368533 COL28A1Q2UY09 1125 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 EXOSC6Q5RKV6 272 aaKnown RBP9.67□□□□□ -0.86
TPM3-212ENST00000368533 ZCCHC12Q6PEW1 402 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 RPTNQ6XPR3 784 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 MEPCEQ7L2J0 689 aaKnown RBP9.67□□□□□ -0.86
TPM3-212ENST00000368533 BMP8AQ7Z5Y6 402 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 OR1N1Q8NGS0 311 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 ADIPOR1Q96A54 375 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 BPIFA2Q96DR5 249 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 SPSB2Q99619 263 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 TMEM43Q9BTV4 400 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 ANKRD10Q9NXR5 420 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 COPZ2Q9P299 210 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 RPS6KB2Q9UBS0 482 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 MED31Q9Y3C7 131 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 MAB21L2Q9Y586 359 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 SIRT4Q9Y6E7 314 aaPredicted RBP9.67□□□□□ -0.86
TPM3-212ENST00000368533 MGAQ8IWI9 3026 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 SHISA8B8ZZ34 492 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 G3V3Y1 287 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 SCDO00767 359 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 SEC14L5O43304 696 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 RNF13O43567 381 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 SIX6O95475 246 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 PPP1R3DO95685 299 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 THBS1P07996 1170 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 ANXA3P12429 323 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 STOMP27105 288 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 EVX1P49640 407 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 DEFA5Q01523 94 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 CEACAM19Q7Z692 300 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 RABEPKQ7Z6M1 372 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 GID4Q8IVV7 300 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 LILRB2Q8N423 598 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 OR2T35Q8NGX2 323 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 ZNF563Q8TA94 476 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 G6PC3Q9BUM1 346 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 TINAGL1Q9GZM7 467 aaPredicted RBP9.67□□□□□ -0.86
TPM3-212ENST00000368533 ABCG5Q9H222 651 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 ISYNA1Q9NPH2 558 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 TRIM36Q9NQ86 728 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 NKIRAS2Q9NYR9 191 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 FBXL4Q9UKA2 621 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 EML6Q6ZMW3 1958 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 PRSS44E7EML9 344 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 NTN3O00634 580 aaPredicted RBP9.67□□□□□ -0.86
TPM3-212ENST00000368533 MAGEB4O15481 346 aaPredicted RBP9.67□□□□□ -0.86
TPM3-212ENST00000368533 YKT6O15498 198 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 RGS9O75916 674 aaPredicted RBP9.67□□□□□ -0.86
TPM3-212ENST00000368533 RCBTB2O95199 551 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 TFPIP10646 304 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 CD59P13987 128 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 ELK1P19419 428 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 PYCR1P32322 319 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 CAPZA2P47755 286 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 RNF4P78317 190 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 THSD4Q6ZMP0 1018 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 MRGPREQ86SM8 312 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 LUZP2Q86TE4 346 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 OAFQ86UD1 273 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 OR52N1Q8NH53 320 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 OR5W2Q8NH69 310 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 WDR89Q96FK6 387 aaPredicted RBP9.67□□□□□ -0.86
TPM3-212ENST00000368533 SLC46A1Q96NT5 459 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 MED17Q9NVC6 651 aa9.67□□□□□ -0.86
TPM3-212ENST00000368533 TRBV23-1A0A0A0MS06 115 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 E9PI62 339 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 RAB3AP20336 220 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 PPICP45877 212 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 HCCSP53701 268 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 FOXK2Q01167 660 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 HSF2Q03933 536 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 CAMK2DQ13557 499 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 NIPAL3Q6P499 406 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 OVCH1Q7RTY7 1134 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 FAM98AQ8NCA5 519 aaKnown RBP9.66□□□□□ -0.86
TPM3-212ENST00000368533 APCDD1LQ8NCL9 501 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 DMRTA2Q96SC8 542 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 TBL1XR1Q9BZK7 514 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 RNF32Q9H0A6 362 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 NCDNQ9UBB6 729 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 GPN3Q9UHW5 284 aaPredicted RBP9.66□□□□□ -0.86
TPM3-212ENST00000368533 LOXL2Q9Y4K0 774 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms