RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 APOBEC3AP31941 199 aaPredicted RBP16.46■□□□□ 0.23
CKS1B-203ENST00000368439 AQP2P41181 271 aa16.46■□□□□ 0.23
CKS1B-203ENST00000368439 RUNX1T1Q06455 604 aa16.46■□□□□ 0.23
CKS1B-203ENST00000368439 FXNQ16595 210 aa16.46■□□□□ 0.23
CKS1B-203ENST00000368439 ZNF813Q6ZN06 617 aa16.46■□□□□ 0.23
CKS1B-203ENST00000368439 MDP1Q86V88 176 aa16.46■□□□□ 0.23
CKS1B-203ENST00000368439 FBXL14Q8N1E6 418 aa16.46■□□□□ 0.23
CKS1B-203ENST00000368439 ZNF566Q969W8 418 aa16.46■□□□□ 0.23
CKS1B-203ENST00000368439 FOXB1Q99853 325 aa16.46■□□□□ 0.23
CKS1B-203ENST00000368439 MRPL13Q9BYD1 178 aaKnown RBP16.46■□□□□ 0.23
CKS1B-203ENST00000368439 ARL8BQ9NVJ2 186 aa16.46■□□□□ 0.23
CKS1B-203ENST00000368439 EGFL7Q9UHF1 273 aa16.46■□□□□ 0.23
CKS1B-203ENST00000368439 POFUT2Q9Y2G5 429 aa16.46■□□□□ 0.23
CKS1B-203ENST00000368439 HTR3EA5X5Y0 456 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 BCL10O95999 233 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 HLA-HP01893 362 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 CRYAAP02489 173 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 B4GALT1P15291 398 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 MAKP20794 623 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 ARR3P36575 388 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 FHL1Q13642 323 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 ETFDHQ16134 617 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 SWI5Q1ZZU3 235 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 MST1LQ2TV78 715 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 GLYATQ6IB77 296 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 RNF148Q8N7C7 305 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 ASB10Q8WXI3 467 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 FAM162AQ96A26 154 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 BPIFA2Q96DR5 249 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 FNDC11Q9BVV2 318 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 CACNG6Q9BXT2 260 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 HIF3AQ9Y2N7 669 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 CR1P17927 2039 aa16.45■□□□□ 0.22
CKS1B-203ENST00000368439 IFI30P13284 250 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 ACVR1BP36896 505 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 IDH3GP51553 393 aaPredicted RBP16.44■□□□□ 0.22
CKS1B-203ENST00000368439 HGFACQ04756 655 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 PRKCDQ05655 676 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 TNK1Q13470 666 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 LAPTM4AQ15012 233 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 TRAM2Q15035 370 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 CLEC12BQ2HXU8 276 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 ARMC4Q5T2S8 1044 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 FKBP9P1Q75LS8 142 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 NRMQ8IXM6 262 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 FAM86B1Q8N7N1 296 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 ANKS4BQ8N8V4 417 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 FAM156AQ8NDB6 213 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 LRRC37BQ96QE4 947 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 INIPQ9NRY2 104 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 DCAF13Q9NV06 445 aaKnown RBP16.44■□□□□ 0.22
CKS1B-203ENST00000368439 ADA2Q9NZK5 511 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 CD300AQ9UGN4 299 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 TAGLN3Q9UI15 199 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 ENPP4Q9Y6X5 453 aa16.44■□□□□ 0.22
CKS1B-203ENST00000368439 NSD1Q96L73 2696 aaPredicted RBP16.44■□□□□ 0.22
CKS1B-203ENST00000368439 NIPBLQ6KC79 2804 aaeCLIP16.44■□□□□ 0.22
CKS1B-203ENST00000368439 A0A087WUU8 490 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 IGHV2OR16-5A0A0B4J2B6 119 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 A0A1W2PRG6 482 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 NPIPB13A6NJU9 1138 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 CENPBD1B2RD01 187 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 NPIPB4C9JG80 1138 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 H7C417 338 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 DYNC1I1O14576 645 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 DHHO43323 396 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 HSD17B1P14061 328 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 ZNF14P17017 642 aaPredicted RBP16.43■□□□□ 0.22
CKS1B-203ENST00000368439 IFNA8P32881 189 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 ZNF133P52736 654 aaPredicted RBP16.43■□□□□ 0.22
CKS1B-203ENST00000368439 IQCCQ4KMZ1 466 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 TBPL2Q6SJ96 375 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 PIWIL3Q7Z3Z3 882 aaKnown RBP16.43■□□□□ 0.22
CKS1B-203ENST00000368439 MEX3DQ86XN8 651 aaKnown RBP16.43■□□□□ 0.22
CKS1B-203ENST00000368439 PGAM4Q8N0Y7 254 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 LRRC75AQ8NAA5 344 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 FGFBP3Q8TAT2 258 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 ACOT11Q8WXI4 607 aaPredicted RBP16.43■□□□□ 0.22
CKS1B-203ENST00000368439 C7orf34Q96L11 122 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 ZNF347Q96SE7 839 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 GORASP2Q9H8Y8 452 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 CA10Q9NS85 328 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 RPS6KA6Q9UK32 745 aa16.43■□□□□ 0.22
CKS1B-203ENST00000368439 ANK3Q12955 4377 aaKnown RBP16.42■□□□□ 0.22
CKS1B-203ENST00000368439 SMAD7O15105 426 aaKnown RBP16.42■□□□□ 0.22
CKS1B-203ENST00000368439 TRMUO75648 421 aaKnown RBP16.42■□□□□ 0.22
CKS1B-203ENST00000368439 DCTN3O75935 186 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 IGHG1P01857 330 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 QDPRP09417 244 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 ACADSP16219 412 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 CAPZA2P47755 286 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 NPRL3Q12980 569 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 ADIPOQQ15848 244 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 GSG1Q2KHT4 349 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 SKA3Q8IX90 412 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 RNF113BQ8IZP6 322 aaKnown RBP16.42■□□□□ 0.22
CKS1B-203ENST00000368439 NOXO1Q8NFA2 376 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 NUP37Q8NFH4 326 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 MCHR2Q969V1 340 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 NMD3Q96D46 503 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms