RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 KCTD19Q17RG1 926 aaPredicted RBP2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 RNASEKQ6P5S7 137 aaKnown RBP2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 ZNF836Q6ZNA1 936 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 LRRC74BQ6ZQY2 392 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 RUFY3Q7L099 469 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 MS4A15Q8N5U1 240 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 VN1R2Q8NFZ6 395 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 OR2G2Q8NGZ5 317 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 PLPPR1Q8TBJ4 325 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 DTX3LQ8TDB6 740 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 SGK3Q96BR1 496 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 FAM210BQ96KR6 192 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 HSFY1Q96LI6 401 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 MYCBPQ99417 103 aaPredicted RBP2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 NEUROG2Q9H2A3 272 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 CWH43Q9H720 699 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 CYTL1Q9NRR1 136 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 GNPTGQ9UJJ9 305 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 ZNF223Q9UK11 482 aaPredicted RBP2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 WSB1Q9Y6I7 421 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 PDS5BQ9NTI5 1447 aa2.17□□□□□ -2.06
ECHDC1-201ENST00000368287 ARID1AO14497 2285 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 A0A0U1RQS6 177 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 OR2AG2A6NM03 316 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 ZNF716A6NP11 495 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 PPP1R2P9O14990 202 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 DFNA5O60443 496 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 TSPAN13O95857 204 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 FGGP02679 453 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 SERPIND1P05546 499 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 CSF3P09919 207 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 ZNF735P0CB33 412 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 PNMA6AP0CW24 399 aaPredicted RBP2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 ZNF43P17038 809 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 ZNF30P17039 623 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 CRYBB2P43320 205 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 SULT1E1P49888 294 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 PPOXP50336 477 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 RORCP51449 518 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 SUB1P53999 127 aaKnown RBP eCLIP2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 KCNJ2P63252 427 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 PAX5Q02548 391 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 RFX4Q33E94 735 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 TFDP3Q5H9I0 405 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 CCDC183Q5T5S1 534 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 OR51G1Q8NGK1 321 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 OR1S2Q8NGQ3 325 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 OR2G3Q8NGZ4 309 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 KCNG3Q8TAE7 436 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 MARCH1Q8TCQ1 289 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 TMEM54Q969K7 222 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 DNAJC19Q96DA6 116 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 GABARAPL3Q9BY60 117 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 GPR61Q9BZJ8 451 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 MFFQ9GZY8 342 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 CDC42EP4Q9H3Q1 356 aaKnown RBP2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 RANBP3Q9H6Z4 567 aaPredicted RBP2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 ANKRA2Q9H9E1 313 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 DMAP1Q9NPF5 467 aaPredicted RBP2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 IKZF2Q9UKS7 526 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 PACSIN2Q9UNF0 486 aaPredicted RBP2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 FANCIQ9NVI1 1328 aa2.16□□□□□ -2.06
ECHDC1-201ENST00000368287 CNTNAP1P78357 1384 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 KANK1Q14678 1352 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 CEMIPQ8WUJ3 1361 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 PLAC8L1A1L4L8 177 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 GOLGA8OA6NCC3 632 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 FAM47DPA6NHR8 397 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 RSPH10B2B2RC85 870 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 GOLGA8NF8WBI6 632 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 H0Y8G0 127 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 TMX2-CTNND1H3BSU7 103 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 AP3B1O00203 1094 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 PES1O00541 588 aaKnown RBP2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 SLC31A2O15432 143 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 SS18L1O75177 396 aaPredicted RBP2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 CRYGBP07316 175 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 RSPH10BP0C881 870 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 IGHV3-43DP0DP04 118 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 ADRB3P13945 408 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 RORAP35398 523 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 NMUP48645 174 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 GPX6P59796 221 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 RPS21P63220 83 aaKnown RBP2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 AQP6Q13520 282 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 VAX1Q5SQQ9 334 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 PRAMEF20Q5VT98 475 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 SASS6Q6UVJ0 657 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 LINC01551Q86U37 167 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 NECAB1Q8N987 351 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 SDR42E1Q8WUS8 393 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 GIMAP1Q8WWP7 306 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 IFT74Q96LB3 600 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 SH3GL1Q99961 368 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 PLA2G2FQ9BZM2 168 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 GLRX2Q9NS18 164 aa2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 RBAKQ9NYW8 714 aaPredicted RBP2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 LSM7Q9UK45 103 aaKnown RBP2.15□□□□□ -2.07
ECHDC1-201ENST00000368287 IGKV2D-24A0A075B6R9 120 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms