RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 VSX1Q9NZR4 365 aaPredicted RBP12.67□□□□□ -0.38
USF1-202ENST00000368020 MALT1Q9UDY8 824 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 CEP250Q9BV73 2442 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 TMEM72A0PK05 275 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 ZNF208O43345 1280 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 GDF9O60383 454 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 FZD7O75084 574 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 ZFAND5O76080 213 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 EIF4EP06730 217 aaKnown RBP12.66□□□□□ -0.38
USF1-202ENST00000368020 HLA-DMAP28067 261 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 DDOSTP39656 456 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 SCAND1P57086 179 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 OR10A3P58181 314 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 CD300CQ08708 224 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 Q499Y3 187 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 UBE2NLQ5JXB2 153 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 RSBN1Q5VWQ0 802 aaPredicted RBP12.66□□□□□ -0.38
USF1-202ENST00000368020 ZNF385CQ66K41 422 aaPredicted RBP12.66□□□□□ -0.38
USF1-202ENST00000368020 BICRALQ6AI39 1079 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 PWWP2BQ6NUJ5 590 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 DNM1P34Q6PK57 102 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 SPATC1Q76KD6 591 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 TMPRSS9Q7Z410 1059 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 CPEB2Q7Z5Q1 589 aaKnown RBP12.66□□□□□ -0.38
USF1-202ENST00000368020 GLRX5Q86SX6 157 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 OR6V1Q8N148 313 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 GHDCQ8N2G8 530 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 ZNF511Q8NB15 262 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 OR4M1Q8NGD0 313 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 MFSD8Q8NHS3 518 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 ZNF519Q8TB69 540 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 SLC22A8Q8TCC7 542 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 C15orf40Q8WUR7 153 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 RNF138Q8WVD3 245 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 DDIT4LQ96D03 193 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 GFM1Q96RP9 751 aaKnown RBP12.66□□□□□ -0.38
USF1-202ENST00000368020 PDCD1LG2Q9BQ51 273 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 TTTY10Q9BZA0 68 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 HDHD2Q9H0R4 259 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 SYT4Q9H2B2 425 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 SRA1Q9HD15 236 aaKnown RBP12.66□□□□□ -0.38
USF1-202ENST00000368020 B3GAT2Q9NPZ5 323 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 AKAP7Q9P0M2 348 aaPredicted RBP12.66□□□□□ -0.38
USF1-202ENST00000368020 PCDHGA1Q9Y5H4 931 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 CPAMD8Q8IZJ3 1885 aa12.66□□□□□ -0.38
USF1-202ENST00000368020 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 A0A0G2JMP0 313 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 TRBV11-1A0A0K0K1C0 115 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 A0A0X1KG70 313 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 LINC00854A0A1B0GVQ3 168 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 CENPXA8MT69 81 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 AIPO00170 330 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 ARHGEF9O43307 516 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 ORC5O43913 435 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 TPPPO94811 219 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 FGF5P12034 268 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 ALOX5APP20292 161 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 GRPRP30550 384 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 CCKBRP32239 447 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 DAP3P51398 398 aaKnown RBP12.65□□□□□ -0.38
USF1-202ENST00000368020 MMP15P51511 669 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 ZP4Q12836 540 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 ZNF57Q68EA5 555 aaPredicted RBP12.65□□□□□ -0.38
USF1-202ENST00000368020 FDX2Q6P4F2 183 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 POMZP3Q6PJE2 187 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 TMEM205Q6UW68 189 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 LRRN1Q6UXK5 716 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 ASCL5Q7RTU5 278 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 ZNF454Q8N9F8 522 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 OR4M2Q8NGB6 313 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 OR13C5Q8NGS8 318 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 OR6N2Q8NGY6 317 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 OR6F1Q8NGZ6 308 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 OTOSQ8NHW6 89 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 HGDQ93099 445 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 CREB3L1Q96BA8 519 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 SLC25A36Q96CQ1 311 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 DERL3Q96Q80 235 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 C7orf50Q9BRJ6 194 aaKnown RBP12.65□□□□□ -0.38
USF1-202ENST00000368020 THAP7Q9BT49 309 aaPredicted RBP12.65□□□□□ -0.38
USF1-202ENST00000368020 BRD7Q9NPI1 651 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 D6RAR5 112 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 ETV2O00321 342 aaPredicted RBP12.65□□□□□ -0.38
USF1-202ENST00000368020 PLPP3O14495 311 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 TFECO14948 347 aaPredicted RBP12.65□□□□□ -0.38
USF1-202ENST00000368020 CTDSPLO15194 276 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 SLC43A1O75387 559 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 UPK3AO75631 287 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 ZFPL1O95159 310 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 ABHD16AO95870 558 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 PSKH1P11801 424 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 AHCYP23526 432 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 PSMB10P40306 273 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 KIR2DL3P43628 341 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 CLDN20P56880 219 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 ACKR1Q16570 336 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 SLC25A35Q3KQZ1 300 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 CEP78Q5JTW2 689 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 LIPNQ5VXI9 398 aa12.65□□□□□ -0.38
USF1-202ENST00000368020 KCTD18Q6PI47 426 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms