RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 AKR1C1Q04828 323 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 IRF4Q15306 451 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 SF3A2Q15428 464 aaKnown RBP8□□□□□ -1.13
SYNE1-206ENST00000367253 FIGNL1Q6PIW4 674 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 KLBQ86Z14 1044 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 TMEM139Q8IV31 216 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 LYSMD2Q8IV50 215 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 MS4A15Q8N5U1 240 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 BBS10Q8TAM1 723 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 SFT2D1Q8WV19 159 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 MYH6P13533 1939 aa8□□□□□ -1.13
SYNE1-206ENST00000367253 AGAP14A8MT82 685 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 OR7C2O60412 319 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 PNMTP11086 282 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 IL1RNP18510 177 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 UQCRC2P22695 453 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 IL11RAQ14626 422 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 FJX1Q86VR8 437 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 NAT8LQ8N9F0 302 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 OR11G2Q8NGC1 345 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 OR5M8Q8NGP6 311 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 FAM46BQ96A09 425 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 FAM131CQ96AQ9 280 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SLC41A2Q96JW4 573 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SPAG8Q99932 426 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF552Q9H707 407 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-206ENST00000367253 RLIMQ9NVW2 624 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 IL37Q9NZH6 218 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 B3GNT3Q9Y2A9 372 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 ABCA7Q8IZY2 2146 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SERTM2A0A1B0GWG4 89 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 LNP1A1A4G5 178 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 TISP43B9A030 160 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 CD8BP10966 210 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 CEACAM1P13688 526 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 NHLH1Q02575 133 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 FFAR4Q5NUL3 377 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 PLCXD3Q63HM9 321 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 OR4F3Q6IEY1 312 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SLC27A4Q6P1M0 643 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 EPGNQ6UW88 154 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 IQCF1Q8N6M8 205 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 KLHDC1Q8N7A1 406 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 OR6M1Q8NGM8 313 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 ESAMQ96AP7 390 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 UBL7Q96S82 380 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF385DQ9H6B1 395 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 GCM1Q9NP62 436 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 STARD5Q9NSY2 213 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 ACSS1Q9NUB1 689 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-206ENST00000367253 NLE1Q9NVX2 485 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-206ENST00000367253 MTCH1Q9NZJ7 389 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 OR5V1Q9UGF6 321 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 AK3Q9UIJ7 227 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 H3BSH0 61 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 ADAM23O75077 832 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 NMBRP28336 390 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 GGT5P36269 586 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 TAS2R30P59541 319 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 PLP1P60201 277 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 ERVFRD-1P60508 538 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 GRB2P62993 217 aaKnown RBP7.99□□□□□ -1.13
SYNE1-206ENST00000367253 ID2Q02363 134 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 PIGFQ07326 219 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 HYAL1Q12794 435 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SNTB1Q13884 538 aaKnown RBP7.99□□□□□ -1.13
SYNE1-206ENST00000367253 DEFB110Q30KQ9 67 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SLC22A6Q4U2R8 563 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 CLLU1OSQ5K130 101 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 TRMT10BQ6PF06 316 aaKnown RBP7.99□□□□□ -1.13
SYNE1-206ENST00000367253 TMEM65Q6PI78 240 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SLC16A14Q7RTX9 510 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 GNPDA2Q8TDQ7 276 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF75AQ96N20 296 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 HDAC8Q9BY41 377 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 MROQ9BYG7 248 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 LHPPQ9H008 270 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 PLSCR4Q9NRQ2 329 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 KCNIP2Q9NS61 270 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SLC35A3Q9Y2D2 325 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 PUS1Q9Y606 427 aaKnown RBP eCLIP7.99□□□□□ -1.13
SYNE1-206ENST00000367253 A0A1W2PQL4 384 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-206ENST00000367253 LRP5LA4QPB2 252 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SLC17A3O00476 420 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 BPIP17213 487 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SOX18P35713 384 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 TAS2R60P59551 318 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 PPP1CAP62136 330 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SUMO1P63165 101 aaKnown RBP7.99□□□□□ -1.13
SYNE1-206ENST00000367253 CNN3Q15417 329 aaKnown RBP7.99□□□□□ -1.13
SYNE1-206ENST00000367253 CYBRD1Q53TN4 286 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 TXNRD3NBQ6F5E7 133 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 GDPGP1Q6ZNW5 385 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SHFQ7M4L6 423 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SERPINA12Q8IW75 414 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 HS3ST5Q8IZT8 346 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 LRRC57Q8N9N7 239 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SLC24A4Q8NFF2 622 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 MMP28Q9H239 520 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 HRH4Q9H3N8 390 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms