RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 WDR62O43379 1518 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 IGKV2D-24A0A075B6R9 120 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 ZNF726A6NNF4 738 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 H3BNH8 94 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 ERLIN2O94905 339 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 HSD17B2P37059 387 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 EPS15P42566 896 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 YAP1P46937 504 aaKnown RBP2.58□□□□□ -2
RNU6-560P-201ENST00000364007 NCBP2P52298 156 aaKnown RBP eCLIP2.58□□□□□ -2
RNU6-560P-201ENST00000364007 SUB1P53999 127 aaKnown RBP eCLIP2.58□□□□□ -2
RNU6-560P-201ENST00000364007 ACTA1P68133 377 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 KDELC1Q6UW63 502 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 IGFL3Q6UXB1 125 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 LHFPL3Q86UP9 236 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 C12orf56Q8IXR9 622 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 SAXO1Q8IYX7 474 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 OR2L3Q8NG85 312 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 SLC22A8Q8TCC7 542 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 ZFP90Q8TF47 636 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 GEMIN6Q8WXD5 167 aaKnown RBP2.58□□□□□ -2
RNU6-560P-201ENST00000364007 NT5C3BQ969T7 300 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 ECSITQ9BQ95 431 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 GCOM2Q9BZD3 368 aaPredicted RBP2.58□□□□□ -2
RNU6-560P-201ENST00000364007 EXTL2Q9UBQ6 330 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 SUN2Q9UH99 717 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 ASB3Q9Y575 518 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 N6AMT1Q9Y5N5 214 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 PEX16Q9Y5Y5 336 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 ASTN1O14525 1302 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 DENND4AQ7Z401 1863 aa2.58□□□□□ -2
RNU6-560P-201ENST00000364007 IGLV11-55A0A075B6I3 123 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 CIB4A0PJX0 185 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 DLGAP1O14490 977 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 CT62P0C5K7 136 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 RPS2P15880 293 aaKnown RBP2.57□□□□□ -2
RNU6-560P-201ENST00000364007 MX1P20591 662 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 KITLGP21583 273 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 SSR1P43307 286 aaKnown RBP2.57□□□□□ -2
RNU6-560P-201ENST00000364007 CDH4P55283 916 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 FBXW4P57775 412 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 KRTAP10-8P60410 259 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 HMGCS1Q01581 520 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 DEFB116Q30KQ4 102 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 COA6Q5JTJ3 125 aaKnown RBP2.57□□□□□ -2
RNU6-560P-201ENST00000364007 LRRC74BQ6ZQY2 392 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 ASCL5Q7RTU5 278 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 TGIF2LXQ8IUE1 241 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 PCP2Q8IVA1 136 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 HSD17B11Q8NBQ5 300 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 STARD8Q92502 1023 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 IFT74Q96LB3 600 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 GPR61Q9BZJ8 451 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 NT5MQ9NPB1 228 aa2.57□□□□□ -2
RNU6-560P-201ENST00000364007 XKRYO14609 159 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 PSTPIP1O43586 416 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 ANGPTL7O43827 346 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 ZNF324O75467 553 aaPredicted RBP2.56□□□□□ -2
RNU6-560P-201ENST00000364007 TMEM50AO95807 157 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 SERPINA3P01011 423 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 BGLAPP02818 100 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 TLX1NBP0CAT3 122 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 ZNF823P16415 610 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 LONP1P36776 959 aaKnown RBP2.56□□□□□ -2
RNU6-560P-201ENST00000364007 CDKN1BP46527 198 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 RFX3P48380 749 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 RORCP51449 518 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 CCR8P51685 355 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 PFN3P60673 137 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 SLAQ13239 276 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 KCTD21Q4G0X4 260 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 CEP55Q53EZ4 464 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 CTSL3PQ5NE16 218 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 SLC25A48Q6ZT89 311 aaKnown RBP2.56□□□□□ -2
RNU6-560P-201ENST00000364007 CD300LFQ8TDQ1 290 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 TMEM54Q969K7 222 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 CYTL1Q9NRR1 136 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 KIAA1257Q9ULG3 409 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 KANK1Q14678 1352 aa2.56□□□□□ -2
RNU6-560P-201ENST00000364007 FAM240BA0A1B0GVZ2 78 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 GOSR2O14653 212 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 KMOO15229 486 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 SPAG7O75391 227 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 TSPOAP1O95153 1857 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 C2P06681 752 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 SMIM10L1P0DMW3 83 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 FOLR1P15328 257 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 CASP14P31944 242 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 RPL23AP62750 156 aaKnown RBP2.55□□□□□ -2
RNU6-560P-201ENST00000364007 ZNF92Q03936 586 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 KCTD19Q17RG1 926 aaPredicted RBP2.55□□□□□ -2
RNU6-560P-201ENST00000364007 TTLL9Q3SXZ7 439 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 NCCRP1Q6ZVX7 275 aaPredicted RBP2.55□□□□□ -2
RNU6-560P-201ENST00000364007 NBPF5PQ86XG9 351 aaPredicted RBP2.55□□□□□ -2
RNU6-560P-201ENST00000364007 STPG2Q8N412 459 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 MREGQ8N565 214 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 CYB561D1Q8N8Q1 229 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 ZNF606Q8WXB4 792 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 TUBGCP3Q96CW5 907 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 SMIM10Q96HG1 83 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms