RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 SLC19A3Q9BZV2 496 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 C12orf10Q9HB07 376 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 GALNT9Q9HCQ5 603 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 PPP4R1LQ9P1A2 415 aa11.9□□□□□ -0.5
SQSTM1-201ENST00000360718 A0A0G2JMP0 313 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 A0A0X1KG70 313 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 CDC40O60508 579 aaKnown RBP eCLIP11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 DHFRP00374 187 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 NPR2P20594 1047 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 MAKP20794 623 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 SLC16A1P53985 500 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 SUMO3P55854 103 aaPredicted RBP11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 ACTC1P68032 377 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 ACTA1P68133 377 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 CRYZQ08257 329 aaKnown RBP11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 POU4F2Q12837 409 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 RSPO4Q2I0M5 234 aaPredicted RBP11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 COL28A1Q2UY09 1125 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 PYHIN1Q6K0P9 492 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 ARL9Q6T311 187 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 OAFQ86UD1 273 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 GLCCI1Q86VQ1 547 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 ARMC10Q8N2F6 343 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 SLC43A2Q8N370 569 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 MS4A15Q8N5U1 240 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 OR4M2Q8NGB6 313 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 ABHD4Q8TB40 342 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 TBX5Q99593 518 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 MED20Q9H944 212 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 C20orf141Q9NUB4 165 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 SERPINA3P01011 423 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 HK1P19367 917 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 CXCR1P25024 350 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 MSX1P28360 303 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 SHC1P29353 583 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 TACR3P29371 465 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 SLC6A1P30531 599 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 SNTA1Q13424 505 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 ATP1A1-AS1Q5TC04 95 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 B3GNTL1Q67FW5 361 aaPredicted RBP11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 JMJD6Q6NYC1 403 aaPredicted RBP11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 B3GLCTQ6Y288 498 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 CEACAM19Q7Z692 300 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 ATG4DQ86TL0 474 aaPredicted RBP11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 VASH2Q86V25 355 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 SAMD12Q8N8I0 201 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 RNF138Q8WVD3 245 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 ATP13A2Q9NQ11 1180 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 MEPEQ9NQ76 525 aaPredicted RBP11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 HPF1Q9NWY4 346 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 MRPL39Q9NYK5 338 aaKnown RBP11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 TAS2R10Q9NYW0 307 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 STMN3Q9NZ72 180 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 TEKT2Q9UIF3 430 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 WIF1Q9Y5W5 379 aa11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 SIRT4Q9Y6E7 314 aaPredicted RBP11.89□□□□□ -0.51
SQSTM1-201ENST00000360718 CNTRLQ7Z7A1 2325 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 ANKUB1A6NFN9 424 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 SBK2P0C263 348 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 LIPCP11150 499 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 LIFP15018 202 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 ZNF3P17036 446 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 PTGDSP41222 190 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 GPR176Q14439 515 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 TOMM34Q15785 309 aaPredicted RBP11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 ZNF468Q5VIY5 522 aaPredicted RBP11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 OR5M10Q6IEU7 315 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 SFXN4Q6P4A7 337 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 TEX19Q8NA77 164 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 OR4M1Q8NGD0 313 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 GPR119Q8TDV5 335 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 DEDD2Q8WXF8 326 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 PTP4A1Q93096 173 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 SGTBQ96EQ0 304 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 HYLS1Q96M11 299 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 ADAM19Q9H013 955 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 OR51V1Q9H2C8 321 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 MCUBQ9NWR8 336 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 HAO2Q9NYQ3 351 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 ZNF780AO75290 641 aaPredicted RBP11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 IFNGP01579 166 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 AHCYP23526 432 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 FXYD6P3P58550 94 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 PITPNAQ00169 270 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 SLC3A1Q07837 685 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 Q5BKY6 102 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 H3F3CQ6NXT2 135 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 CREB3L2Q70SY1 520 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 ZNF767PQ75MW2 155 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 PSMF1Q92530 271 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 KISS1RQ969F8 398 aaPredicted RBP11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 THOC3Q96J01 351 aaKnown RBP11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 SGCZQ96LD1 299 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 FER1L6-AS2Q96M78 137 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 ABCG5Q9H222 651 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 RASD1Q9Y272 281 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 SIGLEC7Q9Y286 467 aa11.88□□□□□ -0.51
SQSTM1-201ENST00000360718 FRYQ5TBA9 3013 aa11.87□□□□□ -0.51
SQSTM1-201ENST00000360718 ZC3H12DA2A288 527 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms