RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 ZNF93P35789 620 aaPredicted RBP12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 HNRNPA3P51991 378 aaKnown RBP12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 SYT14P1Q58G82 188 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 PRICKLE2Q7Z3G6 844 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 BPIFCQ8NFQ6 507 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 MUTYHQ9UIF7 546 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 TRAPPC2LQ9UL33 140 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 FAM96BQ9Y3D0 163 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 ARL2-SNX15V9GYD0 113 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 ZNF727A8MUV8 499 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 ST8SIA3O43173 380 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 ZNF354AO60765 605 aaPredicted RBP12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 ACHEP22303 614 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 PSMB6P28072 239 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 ADRA1AP35348 466 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 MLF1P58340 268 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 ZNF90Q03938 601 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 IKZF1Q13422 519 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 CST6Q15828 149 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 USP53Q70EK8 1073 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 HSD11B1LQ7Z5J1 315 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 SCD5Q86SK9 330 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 NKAIN3Q8N8D7 197 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 GAS2L1Q99501 681 aaPredicted RBP12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 ULBP3Q9BZM4 244 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 CDCP1Q9H5V8 836 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 UBQLN4Q9NRR5 601 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 MYH3P11055 1940 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 FITM1A5D6W6 292 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 FOXE1O00358 373 aaPredicted RBP12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 HSPB6O14558 160 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 TOX4O94842 621 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 OPN1LWP04000 364 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 CALCBP10092 127 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 GCH1P30793 250 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 CTSCP53634 463 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 AQP6Q13520 282 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 CLLU1Q5K131 121 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 IL34Q6ZMJ4 242 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 BAP18Q8IXM2 172 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 ZNF596Q8TC21 504 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 TEX37Q96LM6 180 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 NUDT22Q9BRQ3 303 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 PTDSS2Q9BVG9 487 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 CDCA4Q9BXL8 241 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 CHST2Q9Y4C5 530 aa12.4□□□□□ -0.42
CCDC144A-203ENST00000360495 PEAK1Q9H792 1746 aa12.4□□□□□ -0.43
CCDC144A-203ENST00000360495 TCRBV21S2A2A0A5A6 115 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 A8MVM7 634 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 C1orf105O95561 183 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 ACSM4P0C7M7 580 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 GPR85P60893 370 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 RANP62826 216 aaKnown RBP12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 NPSR1Q6W5P4 371 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 S100A7AQ86SG5 101 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 LMNTD1Q8N9Z9 388 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 HSD17B8Q92506 261 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 YIPF6Q96EC8 236 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 TVP23CQ96ET8 276 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 SMIM14Q96QK8 99 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 PDCD1LG2Q9BQ51 273 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 C16orf70Q9BSU1 422 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 ABHD6Q9BV23 337 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 DUSP21Q9H596 190 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 STARD5Q9NSY2 213 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 SLC35D1Q9NTN3 355 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 NECAP2Q9NVZ3 263 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 A0A087WUU8 490 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 RFPL4AA6NLU0 287 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 RFPL4AL1F8VTS6 287 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 RGS11O94810 467 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 AIFM1O95831 613 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 OR10A3P58181 314 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 RPUSD3Q6P087 351 aaKnown RBP12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 PRSS35Q8N3Z0 413 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 FOXJ1Q92949 421 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 OPA3Q9H6K4 179 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 NARFLQ9H6Q4 476 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 A4GALTQ9NPC4 353 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 FCER1GP30273 86 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 ARHGAP11BQ3KRB8 267 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 UCN3Q969E3 161 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 FAM122AQ96E09 287 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 SLC17A9Q9BYT1 436 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 OR51I2Q9H344 312 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 HRASLSQ9HDD0 168 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 A0A1B0GUH1 482 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 FAM155AB1AL88 458 aaPredicted RBP12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 MMP11P24347 488 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 PSMB5P28074 263 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 FCGR2CP31995 323 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 CSF2RBP32927 897 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 SLC19A1P41440 591 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 OR1D4P47884 311 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 DHRS4L2Q6PKH6 230 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 OR4A16Q8NH70 328 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 CXorf36Q9H7Y0 433 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 NXT1Q9UKK6 140 aaKnown RBP12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 G3V3Q6 166 aa12.39□□□□□ -0.43
CCDC144A-203ENST00000360495 H0YIV9 168 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms