RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 FBXL21Q9UKT6 434 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF337Q9Y3M9 751 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 SLC22A7Q9Y694 548 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 ARHGEF17Q96PE2 2063 aaPredicted RBP6□□□□□ -1.45
CSDE1-203ENST00000358528 RPS10-NUDT3A0A1W2PQS6 291 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 C2orf74A8MZ97 194 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF736B4DX44 427 aaPredicted RBP6□□□□□ -1.45
CSDE1-203ENST00000358528 FADS1O60427 444 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 SLC16A7O60669 478 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 LILRB3O75022 631 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 KLF8O95600 359 aaPredicted RBP6□□□□□ -1.45
CSDE1-203ENST00000358528 AK1P00568 194 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 NGFRP08138 427 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 CSF1P09603 554 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 PVALBP20472 110 aaPredicted RBP6□□□□□ -1.45
CSDE1-203ENST00000358528 GALP22466 123 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 ITGA3P26006 1051 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 S100A10P60903 97 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 PPP1CAP62136 330 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 BTG2P78543 158 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 FAM53BQ14153 422 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 MEP1BQ16820 701 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 RNASE10Q5GAN6 216 aaKnown RBP6□□□□□ -1.45
CSDE1-203ENST00000358528 PWWP2BQ6NUJ5 590 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 TMEM17Q86X19 198 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 RCBTB1Q8NDN9 531 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF248Q8NDW4 579 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 C15orf40Q8WUR7 153 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 C3orf49Q96BT1 292 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 KLHL15Q96M94 604 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 MYADMQ96S97 322 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 INTS14Q96SY0 518 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 VRK1Q99986 396 aaPredicted RBP6□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF416Q9BWM5 594 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 HEXA-AS1Q9H8Q6 139 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 WDR76Q9H967 626 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 TCF20Q9UGU0 1960 aaKnown RBP6□□□□□ -1.45
CSDE1-203ENST00000358528 A0A0B4J2E0 115 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 A0A1B0GX12 115 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 D6RAR5 112 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 F8W036 122 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 PIN1P1O15428 100 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 KCNAB3O43448 404 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 GLCEO94923 617 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 TGM6O95932 706 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 HNRNPA1P09651 372 aaKnown RBP eCLIP6□□□□□ -1.45
CSDE1-203ENST00000358528 IL12BP29460 328 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 CDKN2AP42771 156 aaKnown RBP6□□□□□ -1.45
CSDE1-203ENST00000358528 BLOC1S1P78537 153 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 PLA2G7Q13093 441 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 GLYATL3Q5SZD4 288 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 GLT8D1Q68CQ7 371 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 USP53Q70EK8 1073 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 FAM219AQ8IW50 185 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 ZFP82Q8N141 532 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF417Q8TAU3 575 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 FAM3DQ96BQ1 224 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 SLC25A38Q96DW6 304 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 SLC25A44Q96H78 314 aaPredicted RBP6□□□□□ -1.45
CSDE1-203ENST00000358528 DPYSL5Q9BPU6 564 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF649Q9BS31 505 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 TEX101Q9BY14 249 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 TBL1XR1Q9BZK7 514 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 GPR160Q9UJ42 338 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF223Q9UK11 482 aaPredicted RBP6□□□□□ -1.45
CSDE1-203ENST00000358528 PCDHGA9Q9Y5G4 932 aaKnown RBP6□□□□□ -1.45
CSDE1-203ENST00000358528 PLXNB3Q9ULL4 1909 aa6□□□□□ -1.45
CSDE1-203ENST00000358528 TRAV8-7A0A075B6U6 113 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 TMEM235A6NFC5 223 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 BRINP1O60477 761 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 OPN1LWP04000 364 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF806P0C7X5 589 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 CD53P19397 219 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 ZP3P21754 424 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 EFNB2P52799 333 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 PRPS1P60891 318 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 SCRN3Q0VDG4 424 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 AIMP2Q13155 320 aaKnown RBP5.99□□□□□ -1.45
CSDE1-203ENST00000358528 GPM6BQ13491 265 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 OR7A5Q15622 319 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 SEZ6L2Q6UXD5 910 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 DPY19L2P2Q6ZN68 376 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 DND1Q8IYX4 353 aaKnown RBP5.99□□□□□ -1.45
CSDE1-203ENST00000358528 SYS1Q8N2H4 156 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 AVL9Q8NBF6 648 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 NAXEQ8NCW5 288 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 OR13C3Q8NGS6 347 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 BADQ92934 168 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 HGDQ93099 445 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 HAVCR1Q96D42 359 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 TMEM41AQ96HV5 264 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 G6PC3Q9BUM1 346 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF768Q9H5H4 540 aaKnown RBP5.99□□□□□ -1.45
CSDE1-203ENST00000358528 SEC61A2Q9H9S3 476 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 POLMQ9NP87 494 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-203ENST00000358528 TAS2R8Q9NYW2 309 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 THAP10Q9P2Z0 257 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF230Q9UIE0 474 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-203ENST00000358528 KCNG2Q9UJ96 466 aa5.99□□□□□ -1.45
CSDE1-203ENST00000358528 A0A1B0GV50 99 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms