RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 NOXO1Q8NFA2 376 aa13.49□□□□□ -0.25
TPM1-206ENST00000358278 OR6N1Q8NGY5 312 aa13.49□□□□□ -0.25
TPM1-206ENST00000358278 ZNF519Q8TB69 540 aa13.49□□□□□ -0.25
TPM1-206ENST00000358278 GABARAPL3Q9BY60 117 aa13.49□□□□□ -0.25
TPM1-206ENST00000358278 OPN3Q9H1Y3 402 aaPredicted RBP13.49□□□□□ -0.25
TPM1-206ENST00000358278 VCX3BQ9H321 246 aa13.49□□□□□ -0.25
TPM1-206ENST00000358278 PLSCR4Q9NRQ2 329 aa13.49□□□□□ -0.25
TPM1-206ENST00000358278 UPB1Q9UBR1 384 aa13.49□□□□□ -0.25
TPM1-206ENST00000358278 OR6C65A6NJZ3 312 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 FAM90A27PA6NNH2 459 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 MSTNO14793 375 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 ARPC3O15145 178 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 ARHGEF9O43307 516 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 IDH3BO43837 385 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 EDNRAP25101 427 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 CSNK1A1P48729 337 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 GINS1Q14691 196 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 PTGES3Q15185 160 aaKnown RBP13.48□□□□□ -0.25
TPM1-206ENST00000358278 SLC25A35Q3KQZ1 300 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 ZIK1Q3SY52 487 aaPredicted RBP13.48□□□□□ -0.25
TPM1-206ENST00000358278 MESTQ5EB52 335 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 SLC35F1Q5T1Q4 408 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 FBXW10Q5XX13 1052 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 WDFY1Q8IWB7 410 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 GPR137CQ8N3F9 429 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 LNX2Q8N448 690 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 POMGNT2Q8NAT1 580 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 SYT14Q8NB59 555 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 OR4Q3Q8NH05 313 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 ALKBH3Q96Q83 286 aaPredicted RBP13.48□□□□□ -0.25
TPM1-206ENST00000358278 SMPD3Q9NY59 655 aaPredicted RBP13.48□□□□□ -0.25
TPM1-206ENST00000358278 PRSS50Q9UI38 385 aa13.48□□□□□ -0.25
TPM1-206ENST00000358278 IMPA2O14732 288 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 TRMUO75648 421 aaKnown RBP13.47□□□□□ -0.25
TPM1-206ENST00000358278 SNAP29O95721 258 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 TXNDC12O95881 172 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 CGAP01215 116 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 PGA4P0DJD7 388 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 PGA3P0DJD8 388 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 HIST1H1CP16403 213 aaKnown RBP13.47□□□□□ -0.25
TPM1-206ENST00000358278 EPHA2P29317 976 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 GIPRP48546 466 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 PTDSS1P48651 473 aaKnown RBP13.47□□□□□ -0.25
TPM1-206ENST00000358278 RUNX1T1Q06455 604 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 LGALS3BPQ08380 585 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 TSPO2Q5TGU0 170 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 TMEM236Q5W0B7 351 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 XKRXQ6PP77 449 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 ADCK1Q86TW2 530 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 ZNF808Q8N4W9 903 aaPredicted RBP13.47□□□□□ -0.25
TPM1-206ENST00000358278 OR4K13Q8NH42 304 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 NRG4Q8WWG1 115 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 RDH12Q96NR8 316 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 TOR3AQ9H497 397 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 SLC25A19Q9HC21 320 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 B3GAT2Q9NPZ5 323 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 RIIAD1A6NNX1 92 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 ZNF587BE7ETH6 402 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 H7C1C5 153 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 M0R3G1 203 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 IFNGP01579 166 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 NR2C1P13056 603 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 AGAP20933 346 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 GRK5P34947 590 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 LCN6P62502 163 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 CDK5Q00535 292 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 FAPQ12884 760 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 FBXW9Q5XUX1 488 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 ACSM5Q6NUN0 579 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 BEND4Q6ZU67 534 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 ABHD12BQ7Z5M8 362 aaPredicted RBP13.47□□□□□ -0.25
TPM1-206ENST00000358278 ZNF610Q8N9Z0 462 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 SDR9C7Q8NEX9 313 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 OR52E2Q8NGJ4 325 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 ITLN2Q8WWU7 325 aaPredicted RBP13.47□□□□□ -0.25
TPM1-206ENST00000358278 HDAC2Q92769 488 aaKnown RBP13.47□□□□□ -0.25
TPM1-206ENST00000358278 LRR1Q96L50 414 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 KCNK17Q96T54 332 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 ALG12Q9BV10 488 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 PRRG3Q9BZD7 231 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 ULBP2Q9BZM5 246 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 SLC7A10Q9NS82 523 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 ASB6Q9NWX5 421 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 MALT1Q9UDY8 824 aa13.47□□□□□ -0.25
TPM1-206ENST00000358278 FOXD3Q9UJU5 478 aaPredicted RBP13.47□□□□□ -0.25
TPM1-206ENST00000358278 FASNP49327 2511 aaKnown RBP13.47□□□□□ -0.25
TPM1-206ENST00000358278 SPTAN1Q13813 2472 aaKnown RBP13.46□□□□□ -0.25
TPM1-206ENST00000358278 ZAR1LA6NP61 321 aa13.46□□□□□ -0.25
TPM1-206ENST00000358278 CENPBD1B2RD01 187 aa13.46□□□□□ -0.25
TPM1-206ENST00000358278 UPK3AO75631 287 aa13.46□□□□□ -0.25
TPM1-206ENST00000358278 CNOT4O95628 575 aaKnown RBP13.46□□□□□ -0.25
TPM1-206ENST00000358278 ZNF3P17036 446 aa13.46□□□□□ -0.25
TPM1-206ENST00000358278 POLR2IP36954 125 aaKnown RBP13.46□□□□□ -0.25
TPM1-206ENST00000358278 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.46□□□□□ -0.25
TPM1-206ENST00000358278 ITGADQ13349 1161 aa13.46□□□□□ -0.25
TPM1-206ENST00000358278 LEG1Q6P5S2 330 aa13.46□□□□□ -0.25
TPM1-206ENST00000358278 Q6ZT83 130 aa13.46□□□□□ -0.25
TPM1-206ENST00000358278 C20orf196Q8IYI0 205 aa13.46□□□□□ -0.25
TPM1-206ENST00000358278 LILRB4Q8NHJ6 448 aa13.46□□□□□ -0.25
TPM1-206ENST00000358278 PLEKHA8Q96JA3 519 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms