RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 TNFRSF17Q02223 184 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 BCL2A1Q16548 175 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 AMER3Q8N944 861 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 KCNE4Q8WWG9 221 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 GIMAP1Q8WWP7 306 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 FAM103A1Q9BTL3 118 aaKnown RBP6.75□□□□□ -1.33
VPS13A-202ENST00000357409 IGKV6-21A0A0C4DH24 114 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 LOC102725191A0A1B0GVB3 256 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 ANGPTL7O43827 346 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 RD3LP0DJH9 198 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 ACTA2P62736 377 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 RACK1P63244 317 aaKnown RBP6.75□□□□□ -1.33
VPS13A-202ENST00000357409 ACTG2P63267 376 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 BAMBIQ13145 260 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 SIX1Q15475 284 aaPredicted RBP6.75□□□□□ -1.33
VPS13A-202ENST00000357409 ETFDHQ16134 617 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 YIF1BQ5BJH7 314 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 MFSD12Q6NUT3 480 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 EGFL6Q8IUX8 553 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 THAP7Q9BT49 309 aaPredicted RBP6.75□□□□□ -1.33
VPS13A-202ENST00000357409 TAS2R8Q9NYW2 309 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 GPR37O15354 613 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 CCL4P13236 92 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 PKLRP30613 574 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 SLC7A9P82251 487 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 AARDQ4LEZ3 155 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF385BQ569K4 471 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 DESI1Q6ICB0 168 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 C22orf15Q8WYQ4 148 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 SGK3Q96BR1 496 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 TMEM231Q9H6L2 316 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 PLEKHB1Q9UF11 243 aaPredicted RBP6.75□□□□□ -1.33
VPS13A-202ENST00000357409 IGHV3OR16-12A0A075B7B8 117 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 GABRPO00591 440 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 B3GALNT1O75752 331 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 WNT1P04628 370 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 ZGLP1P0C6A0 271 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 RAB38P57729 211 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 ACTC1P68032 377 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 ACTA1P68133 377 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 NIPAL1Q6NVV3 410 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 LYPD8Q6UX82 237 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 CLEC9AQ6UXN8 241 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 TMEM92Q6UXU6 159 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 SFTPA2Q8IWL1 248 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 OCIAD1Q9NX40 245 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 SSUH2Q9Y2M2 353 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 MEIKINA0A087WXM9 373 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 MMP2P08253 660 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 TLDC1Q6P9B6 456 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 CCDC71LQ8N9Z2 235 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 NPEPL1Q8NDH3 523 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 SLC38A5Q8WUX1 472 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 TCTEX1D2Q8WW35 142 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 PTHLHP12272 177 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 INSM1Q01101 510 aaPredicted RBP6.75□□□□□ -1.33
VPS13A-202ENST00000357409 VN1R2Q8NFZ6 395 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 NICN1Q9BSH3 213 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 NXF2Q9GZY0 626 aaKnown RBP6.75□□□□□ -1.33
VPS13A-202ENST00000357409 SH2D7A6NKC9 451 aaPredicted RBP6.75□□□□□ -1.33
VPS13A-202ENST00000357409 IDSB3KWA1 339 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 SLC22A2O15244 555 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 SRPX2O60687 465 aaPredicted RBP6.75□□□□□ -1.33
VPS13A-202ENST00000357409 SLC19A2O60779 497 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 NPPBP16860 134 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 PFN3P60673 137 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 HIST2H3PS2Q5TEC6 136 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 FBXL6Q8N531 539 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 GGHQ92820 318 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 A0A1B0GWA3 101 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 ATP6V1G1O75348 118 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 TGIF1Q15583 401 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 HACD4Q5VWC8 232 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 TCTN3Q6NUS6 607 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 RHOUQ7L0Q8 258 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 TMEM230Q96A57 120 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 PTDSS2Q9BVG9 487 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 NMNAT2Q9BZQ4 307 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF337Q9Y3M9 751 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 ZBTB42B2RXF5 422 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF736B4DX44 427 aaPredicted RBP6.74□□□□□ -1.33
VPS13A-202ENST00000357409 F5H5P2 479 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 ICOSLGO75144 302 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 ADRA1AP35348 466 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 RPL23AP62750 156 aaKnown RBP6.74□□□□□ -1.33
VPS13A-202ENST00000357409 TGIF2LYQ8IUE0 185 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF440Q8IYI8 595 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 PRRC1Q96M27 445 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 ABHD14AQ9BUJ0 271 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF320A2RRD8 509 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 NPY4RP50391 375 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 PRDX4Q13162 271 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 GARNL3Q5VVW2 1013 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 OR6M1Q8NGM8 313 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 BRIX1Q8TDN6 353 aaKnown RBP6.74□□□□□ -1.33
VPS13A-202ENST00000357409 TAS2R5Q9NYW4 299 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 ASH2LQ9UBL3 628 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 PURGQ9UJV8 347 aaKnown RBP6.74□□□□□ -1.33
VPS13A-202ENST00000357409 FBXO4Q9UKT5 387 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 PRAMEF25A6NGN4 478 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms