RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 MOB1AQ9H8S9 216 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 MED20Q9H944 212 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 RANGRFQ9HD47 186 aaPredicted RBP10.83□□□□□ -0.68
COL9A1-202ENST00000357250 LOXHD1Q8IVV2 1947 aa10.83□□□□□ -0.68
COL9A1-202ENST00000357250 MEIS3P1A6NDR6 274 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 SOCS6O14544 535 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 GLSO94925 669 aaPredicted RBP10.82□□□□□ -0.68
COL9A1-202ENST00000357250 SBK2P0C263 348 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 MAKP20794 623 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 DPP4P27487 766 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 DDOSTP39656 456 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 GABREP78334 506 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 RBPJQ06330 500 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 DUSP8Q13202 625 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 SHISA6Q6ZSJ9 500 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 SH2D5Q6ZV89 423 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 GJC3Q8NFK1 279 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 ASB16Q96NS5 453 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 OCSTAMPQ9BR26 566 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 SAV1Q9H4B6 383 aaPredicted RBP10.82□□□□□ -0.68
COL9A1-202ENST00000357250 SLC25A19Q9HC21 320 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 GVINP1Q7Z2Y8 2422 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 LCMT2O60294 686 aaKnown RBP10.82□□□□□ -0.68
COL9A1-202ENST00000357250 MED6O75586 246 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 VEGFCP49767 419 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 CLDN17P56750 224 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 GAB1Q13480 694 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 ERV3-1Q14264 604 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 PYCR3Q53H96 274 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 C1orf140Q5VVS0 124 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 H1FNTQ75WM6 255 aaPredicted RBP10.82□□□□□ -0.68
COL9A1-202ENST00000357250 COMTD1Q86VU5 262 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 KIAA1958Q8N8K9 716 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 FAM3DQ96BQ1 224 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 LINC00615Q96LM1 132 aaPredicted RBP10.82□□□□□ -0.68
COL9A1-202ENST00000357250 FER1L6-AS2Q96M78 137 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 CNTNAP3Q9BZ76 1288 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 WASH6PQ9NQA3 447 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 CMC2Q9NRP2 79 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 LY75O60449 1722 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 CACNA1CQ13936 2221 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 NUP214P35658 2090 aaPredicted RBP10.82□□□□□ -0.68
COL9A1-202ENST00000357250 TRIP12Q14669 1992 aaPredicted RBP10.82□□□□□ -0.68
COL9A1-202ENST00000357250 A0A087WV62 115 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 ZAR1LA6NP61 321 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 MPPED1O15442 326 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 SSX4O60224 188 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 FCGR2AP12318 317 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 HBG1P69891 147 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 HBG2P69892 147 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 MAT1AQ00266 395 aaKnown RBP10.82□□□□□ -0.68
COL9A1-202ENST00000357250 SORDQ00796 357 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 SQSTM1Q13501 440 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 ASAH1Q13510 395 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 MLF2Q15773 248 aaPredicted RBP10.82□□□□□ -0.68
COL9A1-202ENST00000357250 PRICKLE2Q7Z3G6 844 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF610Q8N9Z0 462 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 MVB12AQ96EY5 273 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 CHST8Q9H2A9 424 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 SHROOM3Q8TF72 1996 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 SEC16AO15027 2179 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 CDC14CA4D256 554 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 OR7C1O76099 320 aaPredicted RBP10.82□□□□□ -0.68
COL9A1-202ENST00000357250 HOXB5P09067 269 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 ELK1P19419 428 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 SRMP19623 302 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 MEP1BQ16820 701 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 Q6ZTK2 550 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 MUCL1Q96DR8 90 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 ARPC5LQ9BPX5 153 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 C11orf54Q9H0W9 315 aaPredicted RBP10.82□□□□□ -0.68
COL9A1-202ENST00000357250 GPR55Q9Y2T6 319 aaPredicted RBP10.82□□□□□ -0.68
COL9A1-202ENST00000357250 EMC9Q9Y3B6 208 aa10.82□□□□□ -0.68
COL9A1-202ENST00000357250 TRABD2BA6NFA1 517 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 OR6C76A6NM76 312 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 GABARAPH6UMI1 98 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 ENPP1P22413 925 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 POU4F3Q15319 338 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 OR2L13Q8N349 312 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 SDF2Q99470 211 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 TEAD3Q99594 435 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 SLC38A1Q9H2H9 487 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 KCNIP2Q9NS61 270 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 DOCK1Q14185 1865 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 PRAMEF27A3QJZ7 478 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 OR6C6A6NF89 314 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 PRAMEF25A6NGN4 478 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF93P35789 620 aaPredicted RBP10.81□□□□□ -0.68
COL9A1-202ENST00000357250 CD79BP40259 229 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 THBS3P49746 956 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 P2RX1P51575 399 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 CCR5P51681 352 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 BIDP55957 195 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 RPL27P61353 136 aaKnown RBP10.81□□□□□ -0.68
COL9A1-202ENST00000357250 CCSMST1Q4G0I0 132 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 PRAMEF9Q5VWM5 478 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 FBXW12Q6X9E4 464 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 OR11L1Q8NGX0 322 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 PAQR8Q8TEZ7 354 aa10.81□□□□□ -0.68
COL9A1-202ENST00000357250 RNF141Q8WVD5 230 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms