RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 FAM3DQ96BQ1 224 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 FGGYQ96C11 551 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 KIRREL1Q96J84 757 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 C11orf54Q9H0W9 315 aaPredicted RBP13.76□□□□□ -0.21
LMX1B-201ENST00000355497 A4GALTQ9NPC4 353 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 COL1A1P02452 1464 aaPredicted RBP13.76□□□□□ -0.21
LMX1B-201ENST00000355497 ZNF587BE7ETH6 402 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 AQP9O43315 295 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 PRAMEF20Q5VT98 475 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 SLC46A3Q7Z3Q1 461 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 LGI3Q8N145 548 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 LTBP3Q9NS15 1303 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 LMO7Q8WWI1 1683 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 CXCL12P48061 93 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 EDDM3BP56851 147 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 KANSL1Q7Z3B3 1105 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 CLEC14AQ86T13 490 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 DNMT3BQ9UBC3 853 aaKnown RBP13.75□□□□□ -0.21
LMX1B-201ENST00000355497 SIGLEC6O43699 453 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 CA3P07451 260 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 FCER1GP30273 86 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 SLC5A2P31639 672 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 LGALS4P56470 323 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 CELF2-AS1Q8N7Q2 184 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 LFNGQ8NES3 379 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 FAM174AQ8TBP5 190 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 HRASLS5Q96KN8 279 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 SHARPINQ9H0F6 387 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 TAF9BQ9HBM6 251 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.75□□□□□ -0.21
LMX1B-201ENST00000355497 ACKR3P25106 362 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 DMWDQ09019 674 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 PMPCAQ10713 525 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 WDR88Q6ZMY6 472 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 USP51Q70EK9 711 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 CPEB2Q7Z5Q1 589 aaKnown RBP13.75□□□□□ -0.21
LMX1B-201ENST00000355497 FAM173AQ9BQD7 235 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 ZNF230Q9UIE0 474 aaPredicted RBP13.75□□□□□ -0.21
LMX1B-201ENST00000355497 H0YIV9 168 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 ELAVL4P26378 380 aaKnown RBP13.75□□□□□ -0.21
LMX1B-201ENST00000355497 SLC6A11P48066 632 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 C17orf67Q0P5P2 114 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 HES1Q14469 280 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 SUMF1Q8NBK3 374 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 SLC46A1Q96NT5 459 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 NXT1Q9UKK6 140 aaKnown RBP13.75□□□□□ -0.21
LMX1B-201ENST00000355497 PIGLQ9Y2B2 252 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 GPR55Q9Y2T6 319 aaPredicted RBP13.75□□□□□ -0.21
LMX1B-201ENST00000355497 CRYM-AS1A6NIL9 109 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 TMEM200CA6NKL6 621 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 RAB27BO00194 218 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 AQP7O14520 342 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 HCRTR1O43613 425 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 WNT11O96014 354 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 CYBAP13498 195 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 DBPQ10586 325 aaPredicted RBP13.75□□□□□ -0.21
LMX1B-201ENST00000355497 MPPED2Q15777 294 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 MEP1BQ16820 701 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 PHLDA2Q53GA4 152 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 TMEFF1Q8IYR6 380 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 SCCPDHQ8NBX0 429 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 OR51A4Q8NGJ6 313 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 UBTD2Q8WUN7 234 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 TMEM255BQ8WV15 326 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 UCN3Q969E3 161 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 MYOM1P52179 1685 aa13.75□□□□□ -0.21
LMX1B-201ENST00000355497 EIF1BO60739 113 aaKnown RBP13.74□□□□□ -0.21
LMX1B-201ENST00000355497 APEX1P27695 318 aaKnown RBP13.74□□□□□ -0.21
LMX1B-201ENST00000355497 RFX2P48378 723 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 NPY4RP50391 375 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 UBE2G1P62253 170 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 RPL11P62913 178 aaKnown RBP13.74□□□□□ -0.21
LMX1B-201ENST00000355497 ZNF718Q3SXZ3 478 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 EID2Q8N6I1 236 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 OR6M1Q8NGM8 313 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 OR2G3Q8NGZ4 309 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 OR8U1Q8NH10 309 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 LCORQ96JN0 433 aaPredicted RBP13.74□□□□□ -0.21
LMX1B-201ENST00000355497 SEMA6CQ9H3T2 930 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 PLEKHF2Q9H8W4 249 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 LHX3Q9UBR4 397 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 LRRC30A6NM36 301 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 RPA2P15927 270 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 F2RP25116 425 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 ADRA1AP35348 466 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 ETV1P50549 477 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 SLC35D3Q5M8T2 416 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 PIGTQ969N2 578 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 USP22Q9UPT9 525 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 C7orf72A4D263 438 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 DCDP81605 110 aaKnown RBP13.74□□□□□ -0.21
LMX1B-201ENST00000355497 REEP5Q00765 189 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 TBC1D28Q2M2D7 210 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 GLIPR1L1Q6UWM5 242 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 GDF7Q7Z4P5 450 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 OR10R2Q8NGX6 335 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 OPA3Q9H6K4 179 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 SNX11Q9Y5W9 270 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 J3QR89 54 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 ADPRMQ3LIE5 342 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms