RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 MMP17Q9ULZ9 603 aa12.17□□□□□ -0.46
SCN8A-202ENST00000355133 NUPL2O15504 423 aaKnown RBP12.17□□□□□ -0.46
SCN8A-202ENST00000355133 KCNK2O95069 426 aa12.17□□□□□ -0.46
SCN8A-202ENST00000355133 DUSP5Q16690 384 aa12.17□□□□□ -0.46
SCN8A-202ENST00000355133 NHSL2Q5HYW2 709 aa12.17□□□□□ -0.46
SCN8A-202ENST00000355133 APH1AQ96BI3 265 aa12.17□□□□□ -0.46
SCN8A-202ENST00000355133 FBXL2Q9UKC9 423 aa12.17□□□□□ -0.46
SCN8A-202ENST00000355133 COPS3Q9UNS2 423 aa12.17□□□□□ -0.46
SCN8A-202ENST00000355133 A6NHS1 94 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 NKX6-3A6NJ46 265 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 EFSO43281 561 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 ZIC2O95409 532 aaPredicted RBP12.16□□□□□ -0.46
SCN8A-202ENST00000355133 UBBP0CG47 229 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 UBCP0CG48 685 aaKnown RBP12.16□□□□□ -0.46
SCN8A-202ENST00000355133 FPR3P25089 353 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 NFYBP25208 207 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 HES1Q14469 280 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 AFMIDQ63HM1 303 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 OR5AS1Q8N127 324 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 LILRA2Q8N149 483 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 LIPHQ8WWY8 451 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 OR2M2Q96R28 347 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 UBL7Q96S82 380 aaPredicted RBP12.16□□□□□ -0.46
SCN8A-202ENST00000355133 ZNF436Q9C0F3 470 aaPredicted RBP12.16□□□□□ -0.46
SCN8A-202ENST00000355133 P2RY12Q9H244 342 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 UBE2ZQ9H832 354 aaPredicted RBP12.16□□□□□ -0.46
SCN8A-202ENST00000355133 TCRBV5S1A1TA0A578 114 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 M0QYG6 137 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 SULT1C2O00338 296 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 ZNF728P0DKX0 622 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 ZNF92Q03936 586 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 RELAQ04206 551 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 BAXQ07812 192 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 H1FNTQ75WM6 255 aaPredicted RBP12.16□□□□□ -0.46
SCN8A-202ENST00000355133 RBMXL3Q8N7X1 1067 aaKnown RBP12.16□□□□□ -0.46
SCN8A-202ENST00000355133 FAM71CQ8NEG0 241 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 MS4A6EQ96DS6 147 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 NT5DC2Q9H857 520 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 LYRM4Q9HD34 91 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 GPR171O14626 319 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 TNFRSF10CO14798 259 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 CLDN1O95832 211 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 MRPS34P82930 218 aaKnown RBP12.16□□□□□ -0.46
SCN8A-202ENST00000355133 DRAXINQ8NBI3 349 aaPredicted RBP12.16□□□□□ -0.46
SCN8A-202ENST00000355133 EMC6Q9BV81 110 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.16□□□□□ -0.46
SCN8A-202ENST00000355133 LUZP4Q9P127 313 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 DIMT1Q9UNQ2 313 aaKnown RBP12.16□□□□□ -0.46
SCN8A-202ENST00000355133 HSD17B6O14756 317 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 CLN5O75503 358 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 EPHA5P54756 1037 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 Q96M85 177 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 TSSK2Q96PF2 358 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 CNTNAP3Q9BZ76 1288 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 ZDHHC5Q9C0B5 715 aa12.16□□□□□ -0.46
SCN8A-202ENST00000355133 I6L893 689 aaPredicted RBP12.15□□□□□ -0.46
SCN8A-202ENST00000355133 CDK4P11802 303 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 TEAD1P28347 426 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 PGFP49763 221 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 LGALS4P56470 323 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 PLA2G7Q13093 441 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 GLYATL3Q5SZD4 288 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 ATPAF1Q5TC12 328 aaPredicted RBP12.15□□□□□ -0.46
SCN8A-202ENST00000355133 CMIPQ8IY22 773 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 CHST8Q9H2A9 424 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 TMEM38AQ9H6F2 299 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 SLC5A10A0PJK1 596 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 FADS1O60427 444 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 FXNQ16595 210 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 PGAP1Q75T13 922 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 SLC46A3Q7Z3Q1 461 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 SLC7A5P1Q8MH63 180 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 NPFFR2Q9Y5X5 522 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 NUMA1Q14980 2115 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 SHISA7A6NL88 538 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 TGM4P49221 684 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 PRTGQ2VWP7 1150 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 OGFOD3Q6PK18 319 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 S100A7AQ86SG5 101 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 TMEM102Q8N9M5 508 aaPredicted RBP12.15□□□□□ -0.46
SCN8A-202ENST00000355133 RHOXF1Q8NHV9 184 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 STT3BQ8TCJ2 826 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 TCTEX1D2Q8WW35 142 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 C8orf44Q96CB5 159 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 RANGRFQ9HD47 186 aaPredicted RBP12.15□□□□□ -0.46
SCN8A-202ENST00000355133 EIF2DP41214 584 aaKnown RBP12.15□□□□□ -0.46
SCN8A-202ENST00000355133 MTNR1BP49286 362 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 RPS27AP62979 156 aaKnown RBP12.15□□□□□ -0.46
SCN8A-202ENST00000355133 UBA52P62987 128 aaKnown RBP12.15□□□□□ -0.46
SCN8A-202ENST00000355133 EBPQ15125 230 aaKnown RBP12.15□□□□□ -0.46
SCN8A-202ENST00000355133 ELAVL1Q15717 326 aaKnown RBP12.15□□□□□ -0.46
SCN8A-202ENST00000355133 VWA2Q5GFL6 755 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 GRINAQ7Z429 371 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 NKAIN4Q8IVV8 208 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 STACQ99469 402 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 UBQLN3Q9H347 655 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 GNG13Q9P2W3 67 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 PPT2Q9UMR5 302 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 RGPD5Q99666 1765 aa12.15□□□□□ -0.46
SCN8A-202ENST00000355133 NUP98P52948 1817 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms