RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 ZNF724A8MTY0 619 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 FAM157AC9JC47 383 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 H0YAE9 185 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 GTPBP1O00178 669 aaKnown RBP9.77□□□□□ -0.85
RTN3-204ENST00000354497 ACOT8O14734 319 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 OIP5O43482 229 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 ULK1O75385 1050 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 NKX2-2O95096 273 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 MFN2O95140 757 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 GABARAPO95166 117 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 SNAP29O95721 258 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 APOA1P02647 267 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 PROCP04070 461 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 ACP2P11117 423 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 IL7P13232 177 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 PCMT1P22061 227 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 CCR4P51679 360 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 RAC3P60763 192 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 ZNF763Q0D2J5 394 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 TOMM34Q15785 309 aaPredicted RBP9.77□□□□□ -0.85
RTN3-204ENST00000354497 SWI5Q1ZZU3 235 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 VHLLQ6RSH7 139 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 GPRIN3Q6ZVF9 776 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 KCTD8Q6ZWB6 473 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 USP51Q70EK9 711 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 ZNF551Q7Z340 670 aaPredicted RBP9.77□□□□□ -0.85
RTN3-204ENST00000354497 PEG10Q86TG7 708 aaKnown RBP9.77□□□□□ -0.85
RTN3-204ENST00000354497 DEFB107AQ8IZN7 70 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 PGAM4Q8N0Y7 254 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 CADM2Q8N3J6 435 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 ZNF614Q8N883 585 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 COX18Q8N8Q8 333 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 NUP43Q8NFH3 380 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 METTL6Q8TCB7 284 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 DACT3Q96B18 629 aaPredicted RBP9.77□□□□□ -0.85
RTN3-204ENST00000354497 TESCQ96BS2 214 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 OCSTAMPQ9BR26 566 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 TAS2R16Q9NYV7 291 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 CCDC59Q9P031 241 aaKnown RBP9.77□□□□□ -0.85
RTN3-204ENST00000354497 EXTL2Q9UBQ6 330 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 ZNF225Q9UK10 706 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 POLR3HQ9Y535 204 aaPredicted RBP9.77□□□□□ -0.85
RTN3-204ENST00000354497 PCDHGB1Q9Y5G3 927 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 GMPPBQ9Y5P6 360 aa9.77□□□□□ -0.85
RTN3-204ENST00000354497 A0A0X1KG70 313 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 HMX2A2RU54 273 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 ETV6P41212 452 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 SMCPP49901 116 aaPredicted RBP9.76□□□□□ -0.85
RTN3-204ENST00000354497 GDI2P50395 445 aaKnown RBP9.76□□□□□ -0.85
RTN3-204ENST00000354497 P2RX1P51575 399 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 RAD23AP54725 363 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 CDH15P55291 814 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 FOXG1P55316 489 aaPredicted RBP9.76□□□□□ -0.85
RTN3-204ENST00000354497 TEKQ02763 1124 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 CLCQ05315 142 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 SCGB2A2Q13296 93 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 GABRA6Q16445 453 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 MST1LQ2TV78 715 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 NDUFAF6Q330K2 333 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 FAM76BQ5HYJ3 339 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 RBM48Q5RL73 367 aaKnown RBP9.76□□□□□ -0.85
RTN3-204ENST00000354497 CBLN3Q6UW01 205 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 IKBIPQ70UQ0 350 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 GPAT4Q86UL3 456 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 GLCCI1Q86VQ1 547 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 ADGRG3Q86Y34 549 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 CCDC36Q8IYA8 594 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 C4orf33Q8N1A6 199 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 CDRT4Q8N9R6 151 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 OR52E4Q8NGH9 312 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 RPL3LQ92901 407 aaKnown RBP9.76□□□□□ -0.85
RTN3-204ENST00000354497 YIPF5Q969M3 257 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 KCNS3Q9BQ31 491 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 LPAR2Q9HBW0 351 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 IFT46Q9NQC8 304 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 KLHL21Q9UJP4 597 aa9.76□□□□□ -0.85
RTN3-204ENST00000354497 A0A1W2PQD3 144 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 A8MT66 165 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 F8W036 122 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 MRPS14O60783 128 aaKnown RBP9.75□□□□□ -0.85
RTN3-204ENST00000354497 BCAS1O75363 584 aaPredicted RBP9.75□□□□□ -0.85
RTN3-204ENST00000354497 SUPT7LO94864 414 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 COX4I1P13073 169 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 DAOP14920 347 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 EPHA3P29320 983 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 GSTM5P46439 218 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 NKX2-5P52952 324 aaPredicted RBP9.75□□□□□ -0.85
RTN3-204ENST00000354497 DVL1P1P54792 670 aaPredicted RBP9.75□□□□□ -0.85
RTN3-204ENST00000354497 RAB14P61106 215 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 PRKCDQ05655 676 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 LRRC74AQ0VAA2 488 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 GALEQ14376 348 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 DUSP5Q16690 384 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 IMPG1Q17R60 797 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 FAM209BQ5JX69 171 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 PRR31Q5SQ13 230 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 FAM71E1Q6IPT2 247 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 KLHL24Q6TFL4 600 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 WDR31Q8NA23 367 aa9.75□□□□□ -0.85
RTN3-204ENST00000354497 ZNF527Q8NB42 609 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms