RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 F5P12259 2224 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 ICOSLGO75144 302 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 ITGB2P05107 769 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 PTBP1P26599 531 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMAD9-201ENST00000350148 PSMA6P60900 246 aaKnown RBP11.12□□□□□ -0.63
SMAD9-201ENST00000350148 YBX1P67809 324 aaKnown RBP11.12□□□□□ -0.63
SMAD9-201ENST00000350148 FOXK1P85037 733 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 HEPHL1Q6MZM0 1159 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 RPL3LQ92901 407 aaKnown RBP11.12□□□□□ -0.63
SMAD9-201ENST00000350148 NUDT9Q9BW91 350 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 ENKD1Q9H0I2 346 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 F8W036 122 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 GABRPO00591 440 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 CSO75390 466 aaKnown RBP11.12□□□□□ -0.63
SMAD9-201ENST00000350148 F13BP05160 661 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 RAB40ALP0C0E4 278 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 LTBRP36941 435 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 BLOC1S1P78537 153 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 ODF4Q2M2E3 257 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 RTL6Q6ICC9 239 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 MTFR2Q6P444 385 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 SYS1Q8N2H4 156 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 RAB40AQ8WXH6 277 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 GON7Q9BXV9 100 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 KLF13Q9Y2Y9 288 aaPredicted RBP11.12□□□□□ -0.63
SMAD9-201ENST00000350148 A0A1W2PQL4 384 aaPredicted RBP11.12□□□□□ -0.63
SMAD9-201ENST00000350148 SERPINF1P36955 418 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 GZMMP51124 257 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 YIF1BQ5BJH7 314 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 LRRC28Q86X40 367 aaPredicted RBP11.12□□□□□ -0.63
SMAD9-201ENST00000350148 TRMT10AQ8TBZ6 339 aaKnown RBP11.12□□□□□ -0.63
SMAD9-201ENST00000350148 SLAMF7Q9NQ25 335 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 B3GALT5Q9Y2C3 310 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 A0A0B4J2E0 115 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 A0A1B0GX12 115 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 FOLR1P15328 257 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 RAB3AP20336 220 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 GLP1RP43220 463 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF529Q6P280 563 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 OLIG3Q7RTU3 272 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 OR5D14Q8NGL3 314 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 NUBPLQ8TB37 319 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 VN1R1Q9GZP7 353 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 TMEM185BQ9H7F4 350 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 VNN3Q9NY84 501 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 TMEFF2Q9UIK5 374 aaPredicted RBP11.11□□□□□ -0.63
SMAD9-201ENST00000350148 HDGFL3Q9Y3E1 203 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 V9GY05 133 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 A0A087WUJ7 227 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.11□□□□□ -0.63
SMAD9-201ENST00000350148 A0A1W2PQD3 144 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF254O75437 659 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 RLN2P04090 185 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 EEF1A1P68104 462 aaKnown RBP11.11□□□□□ -0.63
SMAD9-201ENST00000350148 CTU2Q2VPK5 515 aaKnown RBP11.11□□□□□ -0.63
SMAD9-201ENST00000350148 VASNQ6EMK4 673 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 COMTD1Q86VU5 262 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 CCDC54Q8NEL0 328 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 WACQ9BTA9 647 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 ATG5Q9H1Y0 275 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 ELOVL3Q9HB03 270 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 KLHL9Q9P2J3 617 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 PILRAQ9UKJ1 303 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 PSMD9O00233 223 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 CYR61O00622 381 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 MAGEB1P43366 347 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 PITPNBP48739 271 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 GPR85P60893 370 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 TFF2Q03403 129 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 JMJD6Q6NYC1 403 aaPredicted RBP11.11□□□□□ -0.63
SMAD9-201ENST00000350148 TEAD3Q99594 435 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 FUZQ9BT04 418 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF226Q9NYT6 803 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 TSC2P49815 1807 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 UPK1BO75841 260 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 DIO1P49895 249 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 CNN3Q15417 329 aaKnown RBP11.11□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF362Q5T0B9 420 aaPredicted RBP11.11□□□□□ -0.63
SMAD9-201ENST00000350148 NIPAL3Q6P499 406 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 ANKRD9Q96BM1 317 aaPredicted RBP11.11□□□□□ -0.63
SMAD9-201ENST00000350148 SLC52A3Q9NQ40 469 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 CES1P1Q9UKY3 287 aa11.11□□□□□ -0.63
SMAD9-201ENST00000350148 TRAV20A0A0B4J274 112 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 SURF4O15260 269 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 EML2O95834 649 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 APEHP13798 732 aaKnown RBP11.1□□□□□ -0.63
SMAD9-201ENST00000350148 LUMP51884 338 aaPredicted RBP11.1□□□□□ -0.63
SMAD9-201ENST00000350148 ANKRD37Q7Z713 158 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF584Q8IVC4 421 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 DTX3Q8N9I9 347 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 GPR32P1Q8NGA4 272 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 SPACA9Q96E40 222 aaPredicted RBP11.1□□□□□ -0.63
SMAD9-201ENST00000350148 NMNAT3Q96T66 252 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 FAM60AQ9NP50 221 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 IL20Q9NYY1 176 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF593O00488 134 aaPredicted RBP11.1□□□□□ -0.63
SMAD9-201ENST00000350148 PRICKLE3O43900 615 aaPredicted RBP11.1□□□□□ -0.63
SMAD9-201ENST00000350148 TP53P04637 393 aaPredicted RBP11.1□□□□□ -0.63
SMAD9-201ENST00000350148 GUSBP08236 651 aa11.1□□□□□ -0.63
SMAD9-201ENST00000350148 S100PP25815 95 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms