RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 AKIRIN1Q9H9L7 192 aaPredicted RBP15.05■□□□□ -0
SAMM50-201ENST00000350028 NOX4Q9NPH5 578 aa15.05■□□□□ -0
SAMM50-201ENST00000350028 IKZF2Q9UKS7 526 aa15.05■□□□□ -0
SAMM50-201ENST00000350028 SLC22A23A1A5C7 686 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 ITGA10O75578 1167 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 OR2J2O76002 312 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 ZNF432O94892 652 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 RPP14O95059 124 aaKnown RBP15.04■□□□□ -0
SAMM50-201ENST00000350028 ZFPL1O95159 310 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 PRKAR1AP10644 381 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 ZNF28P17035 718 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 SRMP19623 302 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 PTGDSP41222 190 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 MAP2K3P46734 347 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 INPP1P49441 399 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 ZNF41P51814 821 aaPredicted RBP15.04■□□□□ -0
SAMM50-201ENST00000350028 TPTEP56180 551 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 SELENBP1Q13228 472 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 PCOLCEQ15113 449 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 SF3A2Q15428 464 aaKnown RBP15.04■□□□□ -0
SAMM50-201ENST00000350028 NTRK2Q16620 822 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 ZNF544Q6NX49 715 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 IL20RBQ6UXL0 311 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 H1FNTQ75WM6 255 aaPredicted RBP15.04■□□□□ -0
SAMM50-201ENST00000350028 DPY19L4Q7Z388 723 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 RDH10Q8IZV5 341 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 OR5AK2Q8NH90 309 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 OTOSQ8NHW6 89 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 THEM6Q8WUY1 208 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 ASB17Q8WXJ9 295 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 NXPE2Q96DL1 559 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 MAP6Q96JE9 813 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 MRGPRX4Q96LA9 322 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 CMTM3Q96MX0 182 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 B3GAT2Q9NPZ5 323 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 SACM1LQ9NTJ5 587 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 CPAMD8Q8IZJ3 1885 aa15.04■□□□□ -0
SAMM50-201ENST00000350028 IGLV1-36A0A0B4J1U3 117 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 NPIPB13A6NJU9 1138 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 CENPBD1B2RD01 187 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 B4DXG7 233 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 C9J4A7 227 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 NPIPB4C9JG80 1138 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 MS4A18H0YCH9 400 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 PIN1P1O15428 100 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 SLC16A7O60669 478 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 FZD7O75084 574 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 ATF1P18846 271 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 MAPK3P27361 379 aaPredicted RBP15.03■□□□□ -0
SAMM50-201ENST00000350028 CRABP1P29762 137 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 PITPNBP48739 271 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 INSM1Q01101 510 aaPredicted RBP15.03■□□□□ -0
SAMM50-201ENST00000350028 PUDPQ08623 228 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 FOXF1Q12946 379 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 CARTPTQ16568 116 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 MS4A18Q3C1V0 323 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 PYHIN1Q6K0P9 492 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 ARSKQ6UWY0 536 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 DTWD2Q8NBA8 298 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 ENKURQ8TC29 256 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 MR1Q95460 341 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 ZC3HAV1LQ96H79 300 aaKnown RBP15.03■□□□□ -0
SAMM50-201ENST00000350028 DERL3Q96Q80 235 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 VDAC3Q9Y277 283 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 AK6Q9Y3D8 172 aaKnown RBP15.03■□□□□ -0
SAMM50-201ENST00000350028 WIF1Q9Y5W5 379 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 KMT2EQ8IZD2 1858 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 A0A0G2JMP0 313 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 A0A0X1KG70 313 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 ZNF593O00488 134 aaPredicted RBP15.03■□□□□ -0
SAMM50-201ENST00000350028 DKK1O94907 266 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 PAHP00439 452 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 HLA-DQA2P01906 255 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 OR7A5Q15622 319 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 BTBD16Q32M84 506 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 FAM205BPQ63HN1 556 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 ZBTB8BQ8NAP8 495 aaPredicted RBP15.03■□□□□ -0
SAMM50-201ENST00000350028 OR4M2Q8NGB6 313 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 OR10G3Q8NGC4 313 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 RGP1Q92546 391 aaPredicted RBP15.03■□□□□ -0
SAMM50-201ENST00000350028 NSMAFQ92636 917 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 SPACA9Q96E40 222 aaPredicted RBP15.03■□□□□ -0
SAMM50-201ENST00000350028 RASL10BQ96S79 203 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 NPAS1Q99742 590 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 CHST11Q9NPF2 352 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 SERINC1Q9NRX5 453 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 RBFOX1Q9NWB1 397 aaKnown RBP15.03■□□□□ -0
SAMM50-201ENST00000350028 FRRS1LQ9P0K9 344 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 SPATA2Q9UM82 520 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 B3GALT1Q9Y5Z6 326 aa15.03■□□□□ -0
SAMM50-201ENST00000350028 TRBV5-5A0A0J9YX44 114 aa15.02□□□□□ -0.01
SAMM50-201ENST00000350028 LDOC1O95751 146 aaPredicted RBP15.02□□□□□ -0.01
SAMM50-201ENST00000350028 GP1BAP07359 652 aa15.02□□□□□ -0.01
SAMM50-201ENST00000350028 TFPIP10646 304 aa15.02□□□□□ -0.01
SAMM50-201ENST00000350028 CCL4P13236 92 aa15.02□□□□□ -0.01
SAMM50-201ENST00000350028 KIR2DL3P43628 341 aa15.02□□□□□ -0.01
SAMM50-201ENST00000350028 DAP3P51398 398 aaKnown RBP15.02□□□□□ -0.01
SAMM50-201ENST00000350028 EXT1Q16394 746 aa15.02□□□□□ -0.01
SAMM50-201ENST00000350028 Q499Y3 187 aa15.02□□□□□ -0.01
SAMM50-201ENST00000350028 HACD4Q5VWC8 232 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms