RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 BBS1Q8NFJ9 593 aa24.02■■□□□ 1.44
SSBP4-202ENST00000348495 DNAJC27Q9NZQ0 273 aa24.02■■□□□ 1.44
SSBP4-202ENST00000348495 SLC22A23A1A5C7 686 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 MBD3L4A6NDZ8 208 aaPredicted RBP24.01■■□□□ 1.43
SSBP4-202ENST00000348495 MBD3L3A6NE82 208 aaPredicted RBP24.01■■□□□ 1.43
SSBP4-202ENST00000348495 MBD3L5A6NJ08 208 aaPredicted RBP24.01■■□□□ 1.43
SSBP4-202ENST00000348495 ZNF726A6NNF4 738 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 PRRG2O14669 202 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 ENTPD6O75354 484 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 PAICSP22234 425 aaKnown RBP24.01■■□□□ 1.43
SSBP4-202ENST00000348495 SLC25A1P53007 311 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 CAMK2DQ13557 499 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 GUSBP1Q15486 140 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 SMN1Q16637 294 aaKnown RBP24.01■■□□□ 1.43
SSBP4-202ENST00000348495 C1orf185Q5T7R7 199 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 UGT2A3Q6UWM9 527 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 P4HA3Q7Z4N8 544 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 DOLPP1Q86YN1 238 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 C9orf106Q8NAJ2 232 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 MBD3L2Q8NHZ7 208 aaPredicted RBP24.01■■□□□ 1.43
SSBP4-202ENST00000348495 NMD3Q96D46 503 aaKnown RBP24.01■■□□□ 1.43
SSBP4-202ENST00000348495 GMPPAQ96IJ6 420 aaPredicted RBP24.01■■□□□ 1.43
SSBP4-202ENST00000348495 ZNF582Q96NG8 517 aaPredicted RBP24.01■■□□□ 1.43
SSBP4-202ENST00000348495 SYT4Q9H2B2 425 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 MED20Q9H944 212 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 GLRX2Q9NS18 164 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 CLN6Q9NWW5 311 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 CENPBD1B2RD01 187 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 IGHG1P01857 330 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 SELENOPP49908 381 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 RBPJQ06330 500 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 HIST3H3Q16695 136 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 MCEMP1Q8IX19 187 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 ZNF566Q969W8 418 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 Q96MT0 163 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 ALG12Q9BV10 488 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 TP63Q9H3D4 680 aaPredicted RBP24.01■■□□□ 1.43
SSBP4-202ENST00000348495 CLEC4AQ9UMR7 237 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 ZGRF1Q86YA3 2104 aa24.01■■□□□ 1.43
SSBP4-202ENST00000348495 MED12LQ86YW9 2145 aa24■■□□□ 1.43
SSBP4-202ENST00000348495 AKAP8O43823 692 aaKnown RBP24■■□□□ 1.43
SSBP4-202ENST00000348495 SS18L1O75177 396 aaPredicted RBP24■■□□□ 1.43
SSBP4-202ENST00000348495 RENP00797 406 aa24■■□□□ 1.43
SSBP4-202ENST00000348495 SLC2A5P22732 501 aa24■■□□□ 1.43
SSBP4-202ENST00000348495 FMO3P31513 532 aa24■■□□□ 1.43
SSBP4-202ENST00000348495 CXCR4P61073 352 aa24■■□□□ 1.43
SSBP4-202ENST00000348495 DBPQ10586 325 aaPredicted RBP24■■□□□ 1.43
SSBP4-202ENST00000348495 SYT14Q8NB59 555 aa24■■□□□ 1.43
SSBP4-202ENST00000348495 TM9SF2Q99805 663 aa24■■□□□ 1.43
SSBP4-202ENST00000348495 SH3D21A4FU49 640 aa23.99■■□□□ 1.43
SSBP4-202ENST00000348495 CLUP10909 449 aa23.99■■□□□ 1.43
SSBP4-202ENST00000348495 NIPAL3Q6P499 406 aa23.99■■□□□ 1.43
SSBP4-202ENST00000348495 AAED1Q7RTV5 226 aa23.99■■□□□ 1.43
SSBP4-202ENST00000348495 NOXO1Q8NFA2 376 aa23.99■■□□□ 1.43
SSBP4-202ENST00000348495 OR9Q1Q8NGQ5 310 aa23.99■■□□□ 1.43
SSBP4-202ENST00000348495 RPRD1BQ9NQG5 326 aaKnown RBP23.99■■□□□ 1.43
SSBP4-202ENST00000348495 FOXD3Q9UJU5 478 aaPredicted RBP23.99■■□□□ 1.43
SSBP4-202ENST00000348495 NOSIPQ9Y314 301 aaKnown RBP23.99■■□□□ 1.43
SSBP4-202ENST00000348495 DCTN6O00399 190 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 PRODHO43272 600 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 AGTR1P30556 359 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 OR6V1Q8N148 313 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 TMEM54Q969K7 222 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 OTULINQ96BN8 352 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 TSSK2Q96PF2 358 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 CARD17Q5XLA6 110 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 OR2A2Q6IF42 318 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 ZBTB46Q86UZ6 589 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 GID4Q8IVV7 300 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 RPRMLQ8N4K4 120 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 NUAK2Q9H093 628 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 PLCXD1Q9NUJ7 323 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 PARPBPQ9NWS1 579 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 ASB6Q9NWX5 421 aa23.98■■□□□ 1.43
SSBP4-202ENST00000348495 DOCK7Q96N67 2140 aa23.97■■□□□ 1.43
SSBP4-202ENST00000348495 GYPBP06028 91 aa23.97■■□□□ 1.43
SSBP4-202ENST00000348495 SPI1P17947 270 aa23.97■■□□□ 1.43
SSBP4-202ENST00000348495 NUDT6P53370 316 aa23.97■■□□□ 1.43
SSBP4-202ENST00000348495 CLRN1P58418 232 aa23.97■■□□□ 1.43
SSBP4-202ENST00000348495 THEM4Q5T1C6 240 aa23.97■■□□□ 1.43
SSBP4-202ENST00000348495 C20orf196Q8IYI0 205 aa23.97■■□□□ 1.43
SSBP4-202ENST00000348495 ZNF786Q8N393 782 aa23.97■■□□□ 1.43
SSBP4-202ENST00000348495 ZNRF4Q8WWF5 429 aa23.97■■□□□ 1.43
SSBP4-202ENST00000348495 TINAGQ9UJW2 476 aa23.97■■□□□ 1.43
SSBP4-202ENST00000348495 FKBP7Q9Y680 259 aa23.97■■□□□ 1.43
SSBP4-202ENST00000348495 ARHGAP21Q5T5U3 1957 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 M0R3G1 203 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 SLC1A7O00341 560 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 MRPL33O75394 65 aaKnown RBP23.96■■□□□ 1.43
SSBP4-202ENST00000348495 TOXO94900 526 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 CTLA4P16410 223 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 FMODQ06828 376 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 B3GNT6Q6ZMB0 384 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 MEPCEQ7L2J0 689 aaKnown RBP23.96■■□□□ 1.43
SSBP4-202ENST00000348495 OR2T4Q8NH00 348 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 FNDC8Q8TC99 324 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 KISS1RQ969F8 398 aaPredicted RBP23.96■■□□□ 1.43
SSBP4-202ENST00000348495 RFKQ969G6 155 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 INTS12Q96CB8 462 aaKnown RBP23.96■■□□□ 1.43
SSBP4-202ENST00000348495 BBC3Q96PG8 261 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms