RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 EEF1A1P5Q5VTE0 462 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 AFMIDQ63HM1 303 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 NECAP1Q8NC96 275 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 ENKD1Q9H0I2 346 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 MIOXQ9UGB7 285 aa11.18□□□□□ -0.62
COL12A1-202ENST00000345356 PSMB5P28074 263 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 IFITM3Q01628 133 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 BDH1Q02338 343 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 PMPCAQ10713 525 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 SLC25A35Q3KQZ1 300 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 OR52W1Q6IF63 320 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 SLCO4C1Q6ZQN7 724 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 PAQR9Q6ZVX9 377 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 HSD17B13Q7Z5P4 300 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-202ENST00000345356 CPEB2Q7Z5Q1 589 aaKnown RBP11.17□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF610Q8N9Z0 462 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 OR52R1Q8NGF1 315 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 OR1J1Q8NGS3 322 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 OSGIN2Q9Y236 505 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 RFPL4AA6NLU0 287 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 RFPL4AL1F8VTS6 287 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 CD3DP04234 171 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 POU3F3P20264 500 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-202ENST00000345356 SDHBP21912 280 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 FCGR2CP31995 323 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 HOXA1P49639 335 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-202ENST00000345356 TLE1Q04724 770 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 MALLQ13021 153 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 IL34Q6ZMJ4 242 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 OR2W3Q7Z3T1 314 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 DAZLQ92904 295 aaKnown RBP11.17□□□□□ -0.62
COL12A1-202ENST00000345356 DDIT4LQ96D03 193 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 MRPL38Q96DV4 380 aaKnown RBP11.17□□□□□ -0.62
COL12A1-202ENST00000345356 AK3Q9UIJ7 227 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 MRPS28Q9Y2Q9 187 aaKnown RBP11.17□□□□□ -0.62
COL12A1-202ENST00000345356 A0A087WUU8 490 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 AIFM1O95831 613 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 TRHRP34981 398 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-202ENST00000345356 SNCAP37840 140 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 CRYBB2P43320 205 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 GBX1Q14549 363 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 ELOCQ15369 112 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 PRAMEF8Q5VWM4 474 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 PRAMEF7Q5VXH5 474 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 FAM219BQ5XKK7 198 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 NKAIN4Q8IVV8 208 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 FIBINQ8TAL6 211 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 ASB13Q8WXK3 278 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 SPTSSAQ969W0 71 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 RAB7BQ96AH8 199 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 CABLES2Q9BTV7 478 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF286AQ9HBT8 521 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 CGGBP1Q9UFW8 167 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-202ENST00000345356 RAB22AQ9UL26 194 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 TP53TG5Q9Y2B4 290 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 LCATP04180 440 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF728P0DKX0 622 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 C5AR1P21730 350 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 SLC36A2Q495M3 483 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 PYCR3Q53H96 274 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 ATPAF1Q5TC12 328 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-202ENST00000345356 SHEQ5VZ18 495 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 PTOV1Q86YD1 416 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 SUMF1Q8NBK3 374 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 KCNG3Q8TAE7 436 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 ARGFXA6NJG6 315 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 PLSCR1O15162 318 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF43P17038 809 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 BLVRBP30043 206 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-202ENST00000345356 SLC6A8P48029 635 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 DHPSP49366 369 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF362Q5T0B9 420 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF574Q6ZN55 896 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-202ENST00000345356 BVESQ8NE79 360 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 CSNK1G1Q9HCP0 422 aa11.17□□□□□ -0.62
COL12A1-202ENST00000345356 A0A1B0GTL3 188 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 IFITM5A6NNB3 132 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 HHLA1C9JL84 531 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 PYCARD-AS1I3L0S3 204 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 M0QZQ0 153 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 QDPRP09417 244 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 CLDN2P57739 230 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 SSX1Q16384 188 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 FAM27D1Q5T7N8 215 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 CA5BP1Q8WTZ4 195 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 RSPRY1Q96DX4 576 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 SIRT5Q9NXA8 310 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 Q9Y3F1 56 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 LY86O95711 162 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 PSMB3P49720 205 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 EFNA3P52797 238 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 DLK2Q6UY11 383 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 LIPIQ6XZB0 460 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 MRPL10Q7Z7H8 261 aaKnown RBP11.16□□□□□ -0.62
COL12A1-202ENST00000345356 SERINC5Q86VE9 423 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 TMEM123Q8N131 208 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 GALNT16Q8N428 558 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 OR13C8Q8NGS7 320 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 C1QTNF6Q9BXI9 259 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 ISG20L2Q9H9L3 353 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms