RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 THAP3Q8WTV1 239 aaPredicted RBP16.67■□□□□ 0.26
SMC4-201ENST00000344722 LAMB1P07942 1786 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 TRAV1-2A0A0B4J238 106 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 DCTN6O00399 190 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 OMGP23515 440 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 NFYBP25208 207 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 RAB13P51153 203 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 GPR85P60893 370 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 DEFB115Q30KQ5 88 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 PLPP7Q8NBV4 271 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 CMTM3Q96MX0 182 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 SEMA4CQ9C0C4 833 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 A0A0J9YY10 115 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 FAM221BA6H8Z2 402 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 ZNF728P0DKX0 622 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 ZNF740Q8NDX6 193 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 DLL4Q9NR61 685 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 A0A1B0GTL3 188 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 KLK3P07288 261 aaPredicted RBP16.66■□□□□ 0.26
SMC4-201ENST00000344722 PLGLB1Q02325 96 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 NSDHLQ15738 373 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 SLC48A1Q6P1K1 146 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 TMEM184AQ6ZMB5 413 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 IL34Q6ZMJ4 242 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 RCBTB1Q8NDN9 531 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 PFN4Q8NHR9 129 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 SMIM19Q96E16 107 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 CXCL16Q9H2A7 254 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 TMEM235A6NFC5 223 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 RFPL4AA6NLU0 287 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 RFPL4AL1F8VTS6 287 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 H3BQ06 376 aaPredicted RBP16.66■□□□□ 0.26
SMC4-201ENST00000344722 MEOX2P50222 304 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 NPY4RP50391 375 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 UBE2MP61081 183 aaKnown RBP16.66■□□□□ 0.26
SMC4-201ENST00000344722 SSBP1Q04837 148 aaKnown RBP16.66■□□□□ 0.26
SMC4-201ENST00000344722 ZNF385BQ569K4 471 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 OR2L13Q8N349 312 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 TIMM29Q9BSF4 260 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 EPHX3Q9H6B9 360 aa16.66■□□□□ 0.26
SMC4-201ENST00000344722 ZC3H12DA2A288 527 aaKnown RBP16.65■□□□□ 0.26
SMC4-201ENST00000344722 H7C1C5 153 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 TK1P04183 234 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 POLR2HP52434 150 aaKnown RBP16.65■□□□□ 0.26
SMC4-201ENST00000344722 LCN6P62502 163 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 RAET1LQ5VY80 246 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 MFSD12Q6NUT3 480 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 Q6ZRG5 221 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 ESPNLQ6ZVH7 1005 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 GAB2Q9UQC2 676 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 PRSS23O95084 383 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 SYNGR4O95473 234 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 CHRM2P08172 466 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 CALCRP30988 508 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 F2RL1P55085 397 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 FAAP20Q6NZ36 180 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 ZNF511Q8NB15 262 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 TOLLIPQ9H0E2 274 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 PLAC1Q9HBJ0 212 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 LTBP3Q9NS15 1303 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 CD14P08571 375 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 CLINT1Q14677 625 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 OR5M8Q8NGP6 311 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 ZMAT3Q9HA38 289 aaKnown RBP16.65■□□□□ 0.26
SMC4-201ENST00000344722 GAR1Q9NY12 217 aaKnown RBP16.65■□□□□ 0.26
SMC4-201ENST00000344722 SLC2A10O95528 541 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 HLA-HP01893 362 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 GALP22466 123 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 TSFMP43897 325 aaKnown RBP16.65■□□□□ 0.26
SMC4-201ENST00000344722 HNRNPKP61978 463 aaKnown RBP eCLIP16.65■□□□□ 0.265e-13■■■■■ 46
SMC4-201ENST00000344722 MEP1BQ16820 701 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 PDZD11Q5EBL8 140 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 LMNTD1Q8N9Z9 388 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 SGK3Q96BR1 496 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 WDR89Q96FK6 387 aaPredicted RBP16.65■□□□□ 0.26
SMC4-201ENST00000344722 RBM24Q9BX46 236 aaKnown RBP16.65■□□□□ 0.26
SMC4-201ENST00000344722 SERTAD4Q9NUC0 356 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 LINC00862A6NCI5 91 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 GFYI3L273 518 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 HBG1P69891 147 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 HBG2P69892 147 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 SSX1Q16384 188 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 SIRT5Q9NXA8 310 aa16.65■□□□□ 0.26
SMC4-201ENST00000344722 FTCDNL1E5RQL4 147 aa16.64■□□□□ 0.25
SMC4-201ENST00000344722 PLPP1O14494 284 aa16.64■□□□□ 0.25
SMC4-201ENST00000344722 RAB4AP20338 218 aa16.64■□□□□ 0.25
SMC4-201ENST00000344722 HLXQ14774 488 aaPredicted RBP16.64■□□□□ 0.25
SMC4-201ENST00000344722 TAF9Q16594 264 aa16.64■□□□□ 0.25
SMC4-201ENST00000344722 OLIG3Q7RTU3 272 aa16.64■□□□□ 0.25
SMC4-201ENST00000344722 PRSS35Q8N3Z0 413 aa16.64■□□□□ 0.25
SMC4-201ENST00000344722 OR9A4Q8NGU2 314 aa16.64■□□□□ 0.25
SMC4-201ENST00000344722 SERINC4A6NH21 518 aa16.64■□□□□ 0.25
SMC4-201ENST00000344722 OR6C76A6NM76 312 aa16.64■□□□□ 0.25
SMC4-201ENST00000344722 EPXP11678 715 aa16.64■□□□□ 0.25
SMC4-201ENST00000344722 TMEM71Q6P5X7 295 aa16.64■□□□□ 0.25
SMC4-201ENST00000344722 KLHDC9Q8NEP7 349 aa16.64■□□□□ 0.25
SMC4-201ENST00000344722 NLGN4YQ8NFZ3 816 aaPredicted RBP16.64■□□□□ 0.25
SMC4-201ENST00000344722 HPSE2Q8WWQ2 592 aa16.64■□□□□ 0.25
SMC4-201ENST00000344722 SLC39A9Q9NUM3 307 aa16.64■□□□□ 0.25
SMC4-201ENST00000344722 FTSJ1Q9UET6 329 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms